Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Slc35a2-202ENSMUST00000115660 3094 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Col8a2P25318 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.02□□□□□ -0.49
Col8a2P25318 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12.02□□□□□ -0.49
Col8a2P25318 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC12.02□□□□□ -0.49
Col8a2P25318 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Gm8239-201ENSMUST00000204094 444 ntTSL 2 BASIC12.02□□□□□ -0.49
Col8a2P25318 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Spsb2-201ENSMUST00000047760 1213 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Col8a2P25318 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Col8a2P25318 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Col8a2P25318 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Col8a2P25318 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Ss18-201ENSMUST00000040924 3090 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Col8a2P25318 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Col8a2P25318 Myef2-206ENSMUST00000142718 2942 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col8a2P25318 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col8a2P25318 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Col8a2P25318 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col8a2P25318 Hlcs-205ENSMUST00000227141 4021 ntAPPRIS ALT2 BASIC12.01□□□□□ -0.49
Col8a2P25318 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col8a2P25318 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col8a2P25318 Dmpk-201ENSMUST00000032568 2761 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Col8a2P25318 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Col8a2P25318 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC12.01□□□□□ -0.49
Col8a2P25318 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC12.01□□□□□ -0.49
Col8a2P25318 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC12.01□□□□□ -0.49
Col8a2P25318 Gm44344-201ENSMUST00000200287 129 ntBASIC12.01□□□□□ -0.49
Col8a2P25318 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col8a2P25318 Bpnt1-205ENSMUST00000210277 1226 ntTSL 5 BASIC12.01□□□□□ -0.49
Col8a2P25318 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Col8a2P25318 Ndufa8-201ENSMUST00000070112 861 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col8a2P25318 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col8a2P25318 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Col8a2P25318 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col8a2P25318 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col8a2P25318 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC12.01□□□□□ -0.49
Col8a2P25318 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col8a2P25318 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col8a2P25318 Gm45504-201ENSMUST00000211407 2107 ntBASIC12.01□□□□□ -0.49
Col8a2P25318 Gale-201ENSMUST00000102540 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Col8a2P25318 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Col8a2P25318 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Col8a2P25318 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col8a2P25318 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC12□□□□□ -0.49
Col8a2P25318 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC12□□□□□ -0.49
Col8a2P25318 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC12□□□□□ -0.49
Col8a2P25318 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC12□□□□□ -0.49
Col8a2P25318 Gm12454-201ENSMUST00000139119 978 ntTSL 2 BASIC12□□□□□ -0.49
Col8a2P25318 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Ccnh-202ENSMUST00000163600 1055 ntTSL 5 BASIC12□□□□□ -0.49
Col8a2P25318 Gm43703-201ENSMUST00000200523 763 ntBASIC12□□□□□ -0.49
Col8a2P25318 Rpl32-202ENSMUST00000203816 906 ntAPPRIS P1 TSL 2 BASIC12□□□□□ -0.49
Col8a2P25318 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC12□□□□□ -0.49
Col8a2P25318 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC12□□□□□ -0.49
Col8a2P25318 Tpi-rs5-201ENSMUST00000216947 774 ntBASIC12□□□□□ -0.49
Col8a2P25318 AC125206.2-201ENSMUST00000217454 574 ntBASIC12□□□□□ -0.49
Col8a2P25318 Gm46209-201ENSMUST00000217912 553 ntBASIC12□□□□□ -0.49
Col8a2P25318 Gm16476-201ENSMUST00000221544 139 ntBASIC12□□□□□ -0.49
Col8a2P25318 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Gm11937-201ENSMUST00000076478 396 ntAPPRIS P1 BASIC12□□□□□ -0.49
Col8a2P25318 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Col8a2P25318 Rnd1-201ENSMUST00000003451 2203 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Psmd8-202ENSMUST00000182328 1391 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Col8a2P25318 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12□□□□□ -0.49
Col8a2P25318 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 42.1 ms