Protein–RNA interactions for Protein: P23440

Pde6b, Rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit beta, mousemouse

Predictions only

Length 856 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pde6bP23440 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6bP23440 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
Pde6bP23440 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6bP23440 Cd302-201ENSMUST00000028356 1257 ntAPPRIS P3 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6bP23440 Lamtor1-201ENSMUST00000033131 1119 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6bP23440 Pdlim7-203ENSMUST00000069968 1006 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6bP23440 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6bP23440 Actg1-204ENSMUST00000106215 1827 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6bP23440 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC15.72■□□□□ 0.11
Pde6bP23440 Tcf21-202ENSMUST00000218002 1788 ntBASIC15.72■□□□□ 0.11
Pde6bP23440 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6bP23440 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6bP23440 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6bP23440 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6bP23440 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
Pde6bP23440 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pde6bP23440 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.11
Pde6bP23440 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pde6bP23440 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pde6bP23440 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC15.71■□□□□ 0.11
Pde6bP23440 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC15.71■□□□□ 0.11
Pde6bP23440 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pde6bP23440 Anapc15-204ENSMUST00000106973 650 ntAPPRIS P1 TSL 2 BASIC15.71■□□□□ 0.11
Pde6bP23440 Gm15653-201ENSMUST00000119247 907 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC15.71■□□□□ 0.11
Pde6bP23440 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC15.71■□□□□ 0.11
Pde6bP23440 Gm29310-201ENSMUST00000185468 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm21825-201ENSMUST00000185728 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm29109-201ENSMUST00000185895 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm21896-201ENSMUST00000186520 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm21873-201ENSMUST00000186728 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm21794-201ENSMUST00000187056 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm21880-201ENSMUST00000187275 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm21826-201ENSMUST00000187451 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm21198-201ENSMUST00000188393 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm21749-201ENSMUST00000189343 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm21901-201ENSMUST00000189568 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm29424-201ENSMUST00000189716 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm28599-201ENSMUST00000189838 694 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm21867-201ENSMUST00000189917 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm29269-201ENSMUST00000190087 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm21722-201ENSMUST00000190153 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm28423-201ENSMUST00000190701 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm21899-201ENSMUST00000190745 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm21910-201ENSMUST00000191163 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm21849-201ENSMUST00000191571 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm28678-201ENSMUST00000191593 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Ndufv3-205ENSMUST00000191598 642 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pde6bP23440 Gm20910-201ENSMUST00000193268 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 Gm37267-201ENSMUST00000194222 681 ntTSL 2 BASIC15.71■□□□□ 0.11
Pde6bP23440 Gm21871-201ENSMUST00000194621 696 ntBASIC15.71■□□□□ 0.11
Pde6bP23440 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC15.71■□□□□ 0.11
Pde6bP23440 Nradd-201ENSMUST00000035069 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pde6bP23440 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pde6bP23440 Slc39a11-203ENSMUST00000106633 2688 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pde6bP23440 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC15.71■□□□□ 0.11
Pde6bP23440 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pde6bP23440 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.11
Pde6bP23440 Capg-203ENSMUST00000114072 1388 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pde6bP23440 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pde6bP23440 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.11
Pde6bP23440 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC15.71■□□□□ 0.1
Pde6bP23440 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC15.71■□□□□ 0.1
Pde6bP23440 Phf8-204ENSMUST00000112666 2556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pde6bP23440 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pde6bP23440 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pde6bP23440 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pde6bP23440 Necab3-201ENSMUST00000000895 1829 ntAPPRIS P2 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pde6bP23440 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC15.71■□□□□ 0.1
Pde6bP23440 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Nt5c3b-205ENSMUST00000107399 1427 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Ecm1-201ENSMUST00000029753 1894 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Smox-208ENSMUST00000110188 1991 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pde6bP23440 Gm3373-202ENSMUST00000177556 1955 ntAPPRIS P5 TSL 5 BASIC15.7■□□□□ 0.1
Pde6bP23440 Gm3500-201ENSMUST00000177986 1955 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pde6bP23440 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC15.7■□□□□ 0.1
Pde6bP23440 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.7■□□□□ 0.1
Pde6bP23440 Trav13-3-201ENSMUST00000117226 336 ntBASIC15.7■□□□□ 0.1
Pde6bP23440 Gm6222-201ENSMUST00000120787 396 ntBASIC15.7■□□□□ 0.1
Pde6bP23440 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Mcfd2-202ENSMUST00000129616 813 ntAPPRIS P1 TSL 3 BASIC15.7■□□□□ 0.1
Pde6bP23440 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Cyba-201ENSMUST00000017604 744 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC15.7■□□□□ 0.1
Pde6bP23440 Cplx3-202ENSMUST00000215487 594 ntTSL 3 BASIC15.7■□□□□ 0.1
Pde6bP23440 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC15.7■□□□□ 0.1
Pde6bP23440 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.7■□□□□ 0.1
Pde6bP23440 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Calml4-201ENSMUST00000034777 864 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Cdh11-201ENSMUST00000075190 5647 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.7■□□□□ 0.1
Pde6bP23440 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC15.7■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms