Protein–RNA interactions for Protein: P23198

Cbx3, Chromobox protein homolog 3, mousemouse

Known RBP Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cbx3P23198 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cbx3P23198 Gm6858-201ENSMUST00000208582 1468 ntBASIC13.14□□□□□ -0.31
Cbx3P23198 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cbx3P23198 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cbx3P23198 Pcdh1-202ENSMUST00000159405 3880 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cbx3P23198 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cbx3P23198 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cbx3P23198 Kif1c-204ENSMUST00000137119 6596 ntAPPRIS P2 TSL 5 BASIC13.14□□□□□ -0.31
Cbx3P23198 Nrip2-201ENSMUST00000001561 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cbx3P23198 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cbx3P23198 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Cbx3P23198 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Cbx3P23198 Mest-211ENSMUST00000163949 2561 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Cbx3P23198 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cbx3P23198 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cbx3P23198 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.13□□□□□ -0.31
Cbx3P23198 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cbx3P23198 Duox1-201ENSMUST00000099461 5267 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Cbx3P23198 Bmp2-201ENSMUST00000028836 3555 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cbx3P23198 Wnt7a-201ENSMUST00000032180 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cbx3P23198 Ly9-202ENSMUST00000068878 2488 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cbx3P23198 Gm45011-201ENSMUST00000207620 2297 ntBASIC13.13□□□□□ -0.31
Cbx3P23198 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cbx3P23198 AC132265.1-201ENSMUST00000219233 1665 ntBASIC13.13□□□□□ -0.31
Cbx3P23198 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC13.13□□□□□ -0.31
Cbx3P23198 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Cbx3P23198 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC13.13□□□□□ -0.31
Cbx3P23198 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Cbx3P23198 Gssos2-201ENSMUST00000130859 727 ntTSL 3 BASIC13.13□□□□□ -0.31
Cbx3P23198 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Cbx3P23198 Sec11c-201ENSMUST00000025394 807 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cbx3P23198 Mrps28-201ENSMUST00000042148 783 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cbx3P23198 Pih1d1-201ENSMUST00000085375 1185 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cbx3P23198 Itgb4-203ENSMUST00000106458 5779 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Cbx3P23198 Itga2b-201ENSMUST00000103086 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cbx3P23198 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cbx3P23198 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13.13□□□□□ -0.31
Cbx3P23198 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.13□□□□□ -0.31
Cbx3P23198 Pla2g16-203ENSMUST00000136756 1901 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cbx3P23198 Calu-206ENSMUST00000172974 3063 ntTSL 5 BASIC13.13□□□□□ -0.31
Cbx3P23198 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC13.13□□□□□ -0.31
Cbx3P23198 Nhlh2-203ENSMUST00000198675 3943 ntAPPRIS P1 TSL 2 BASIC13.13□□□□□ -0.31
Cbx3P23198 Elk1-201ENSMUST00000009550 3548 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Cbx3P23198 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cbx3P23198 Epha5-204ENSMUST00000113401 5158 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Fbxl12-203ENSMUST00000131128 4182 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Emd-201ENSMUST00000002029 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Gm18263-201ENSMUST00000220846 1928 ntBASIC13.12□□□□□ -0.31
Cbx3P23198 Pgc-201ENSMUST00000024782 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Ppm1m-201ENSMUST00000076258 1811 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Npb-202ENSMUST00000106194 530 ntAPPRIS ALT2 TSL 2 BASIC13.12□□□□□ -0.31
Cbx3P23198 Npb-203ENSMUST00000106195 542 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Cldn18-203ENSMUST00000131922 860 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 1110065P20Rik-204ENSMUST00000163946 762 ntTSL 2 BASIC13.12□□□□□ -0.31
Cbx3P23198 BC051226-201ENSMUST00000172526 837 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Gm44430-201ENSMUST00000203376 995 ntBASIC13.12□□□□□ -0.31
Cbx3P23198 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.12□□□□□ -0.31
Cbx3P23198 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Cbx3P23198 H2afz-201ENSMUST00000041045 1069 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Limd2-202ENSMUST00000064545 798 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Cbx3P23198 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC13.12□□□□□ -0.31
Cbx3P23198 Abcg8-203ENSMUST00000171915 2284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Nfic-202ENSMUST00000078185 3163 ntTSL 5 BASIC13.12□□□□□ -0.31
Cbx3P23198 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Asap1-217ENSMUST00000177371 6164 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Cbx3P23198 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Rap1gap2-202ENSMUST00000102521 6565 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Cbx3P23198 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC13.12□□□□□ -0.31
Cbx3P23198 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Med16-201ENSMUST00000105378 3197 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Tmem136-201ENSMUST00000061833 3503 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Cbx3P23198 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cbx3P23198 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC13.11□□□□□ -0.31
Cbx3P23198 Gpa33-202ENSMUST00000060833 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cbx3P23198 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cbx3P23198 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cbx3P23198 Mrps27-201ENSMUST00000052249 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cbx3P23198 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cbx3P23198 Aldh6a1-201ENSMUST00000085192 3399 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cbx3P23198 Pqlc3-208ENSMUST00000222203 1706 ntTSL 5 BASIC13.11□□□□□ -0.31
Cbx3P23198 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cbx3P23198 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Cbx3P23198 Fgfr1-203ENSMUST00000119398 3789 ntTSL 1 (best) BASIC13.11□□□□□ -0.31
Cbx3P23198 2610001J05Rik-203ENSMUST00000185219 1606 ntAPPRIS P1 BASIC13.11□□□□□ -0.31
Cbx3P23198 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms