Protein–RNA interactions for Protein: P20334

Tnfrsf9, Tumor necrosis factor receptor superfamily member 9, mousemouse

Predictions only

Length 256 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf9P20334 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC11.85□□□□□ -0.51
Tnfrsf9P20334 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Disc1-205ENSMUST00000117658 2671 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Rab34-203ENSMUST00000108322 1685 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Gm43697-201ENSMUST00000199637 2581 ntBASIC11.84□□□□□ -0.51
Tnfrsf9P20334 St8sia3-201ENSMUST00000025477 6282 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Cfap97-202ENSMUST00000110376 2043 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Aspm-205ENSMUST00000200083 6072 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Twf2-201ENSMUST00000024047 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Matk-203ENSMUST00000119547 1916 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Kif12-205ENSMUST00000156618 2258 ntAPPRIS ALT2 TSL 5 BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Alkbh2-202ENSMUST00000112279 899 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Gm12008-201ENSMUST00000117791 755 ntBASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Gm6257-201ENSMUST00000163864 910 ntBASIC11.84□□□□□ -0.51
Tnfrsf9P20334 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Gm27618-201ENSMUST00000183671 60 ntBASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Gm27989-201ENSMUST00000184721 107 ntBASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 AC158538.2-201ENSMUST00000225455 906 ntBASIC11.84□□□□□ -0.51
Tnfrsf9P20334 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Dgki-203ENSMUST00000101532 4596 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Klf15-203ENSMUST00000203039 2482 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Steap2-205ENSMUST00000115427 3470 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Khdrbs1-201ENSMUST00000066257 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC11.84□□□□□ -0.51
Tnfrsf9P20334 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC11.83□□□□□ -0.51
Tnfrsf9P20334 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.51
Tnfrsf9P20334 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Ccdc115-201ENSMUST00000042493 1705 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Gm27528-202ENSMUST00000222916 2012 ntBASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Cryba4-202ENSMUST00000112383 754 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 AC155937.1-201ENSMUST00000125635 831 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Gm15201-201ENSMUST00000136472 1210 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Ppt2-202ENSMUST00000166040 1139 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 G530012D18Rik-201ENSMUST00000178024 420 ntAPPRIS P1 TSL 5 BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Gm8369-204ENSMUST00000188633 1227 ntAPPRIS P1 TSL 3 BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 4930408O17Rik-202ENSMUST00000222624 1131 ntTSL 5 BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Cav3-201ENSMUST00000075477 1157 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 AC107453.4-201ENSMUST00000227068 1817 ntBASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Trim65-201ENSMUST00000067632 3048 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Lrrc57-202ENSMUST00000102497 1962 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 R3hcc1-201ENSMUST00000118374 1726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Tnfrsf9P20334 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Slc26a6-201ENSMUST00000098376 2402 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Hmga1b-201ENSMUST00000105046 1626 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Tnfrsf9P20334 Cnksr2-202ENSMUST00000112513 4471 ntTSL 5 BASIC11.82□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 46.9 ms