Protein–RNA interactions for Protein: P18608

Hmgn1, Non-histone chromosomal protein HMG-14, mousemouse

Known RBP Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hmgn1P18608 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn1P18608 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC13.18□□□□□ -0.3
Hmgn1P18608 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn1P18608 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn1P18608 Usp1-202ENSMUST00000091358 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn1P18608 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn1P18608 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC13.18□□□□□ -0.3
Hmgn1P18608 Mpz-202ENSMUST00000111334 1278 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn1P18608 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC13.18□□□□□ -0.3
Hmgn1P18608 Scpep1os-201ENSMUST00000139592 811 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn1P18608 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.18□□□□□ -0.3
Hmgn1P18608 Gm12781-201ENSMUST00000146269 395 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn1P18608 1500009L16Rik-201ENSMUST00000150459 1194 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn1P18608 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn1P18608 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC13.18□□□□□ -0.3
Hmgn1P18608 Rpp25l-201ENSMUST00000038434 856 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn1P18608 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC13.18□□□□□ -0.3
Hmgn1P18608 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn1P18608 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn1P18608 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn1P18608 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn1P18608 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hmgn1P18608 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn1P18608 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Hmgn1P18608 Matn2-206ENSMUST00000228570 2798 ntBASIC13.18□□□□□ -0.3
Hmgn1P18608 Gm18856-201ENSMUST00000178096 1374 ntBASIC13.18□□□□□ -0.3
Hmgn1P18608 Sesn3-201ENSMUST00000034507 1827 ntTSL 5 BASIC13.18□□□□□ -0.3
Hmgn1P18608 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Hmgn1P18608 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Nat8f3-202ENSMUST00000168531 1347 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Tnn-201ENSMUST00000039178 5817 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.17□□□□□ -0.3
Hmgn1P18608 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Hmgn1P18608 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Ccdc90b-201ENSMUST00000032842 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.17□□□□□ -0.3
Hmgn1P18608 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Gm7230-201ENSMUST00000173026 815 ntBASIC13.17□□□□□ -0.3
Hmgn1P18608 Gm4899-201ENSMUST00000178708 719 ntBASIC13.17□□□□□ -0.3
Hmgn1P18608 Gm6550-201ENSMUST00000187574 993 ntBASIC13.17□□□□□ -0.3
Hmgn1P18608 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.17□□□□□ -0.3
Hmgn1P18608 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC13.17□□□□□ -0.3
Hmgn1P18608 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC13.17□□□□□ -0.3
Hmgn1P18608 AC102291.3-201ENSMUST00000226566 405 ntBASIC13.17□□□□□ -0.3
Hmgn1P18608 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hmgn1P18608 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Hmgn1P18608 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.17□□□□□ -0.3
Hmgn1P18608 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Hmgn1P18608 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Hmgn1P18608 AC164565.1-201ENSMUST00000217520 1484 ntBASIC13.16□□□□□ -0.3
Hmgn1P18608 Per1-203ENSMUST00000102605 4537 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Gcat-201ENSMUST00000006544 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Hmgn1P18608 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC13.16□□□□□ -0.3
Hmgn1P18608 Mdfi-203ENSMUST00000113280 1281 ntTSL 5 BASIC13.16□□□□□ -0.3
Hmgn1P18608 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Gm2272-201ENSMUST00000194903 582 ntBASIC13.16□□□□□ -0.3
Hmgn1P18608 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.16□□□□□ -0.3
Hmgn1P18608 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Insl6-201ENSMUST00000052380 708 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Hmgn1P18608 Bmp3-202ENSMUST00000197143 2739 ntTSL 2 BASIC13.16□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 25.2 ms