Protein–RNA interactions for Protein: P15314

Irf1, Interferon regulatory factor 1, mousemouse

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Irf1P15314 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Irf1P15314 Gm13616-201ENSMUST00000120600 222 ntBASIC13.32□□□□□ -0.28
Irf1P15314 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Irf1P15314 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC13.32□□□□□ -0.28
Irf1P15314 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC13.32□□□□□ -0.28
Irf1P15314 Gm24158-201ENSMUST00000175263 71 ntBASIC13.32□□□□□ -0.28
Irf1P15314 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC13.32□□□□□ -0.28
Irf1P15314 Mir6956-201ENSMUST00000183598 62 ntBASIC13.32□□□□□ -0.28
Irf1P15314 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC13.32□□□□□ -0.28
Irf1P15314 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Irf1P15314 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC13.32□□□□□ -0.28
Irf1P15314 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Irf1P15314 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Irf1P15314 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Irf1P15314 Pex5-201ENSMUST00000035861 3139 ntAPPRIS P4 TSL 1 (best) BASIC13.32□□□□□ -0.28
Irf1P15314 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
Irf1P15314 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
Irf1P15314 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Irf1P15314 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Irf1P15314 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Irf1P15314 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Irf1P15314 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Irf1P15314 Cacna1g-204ENSMUST00000107785 7523 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Irf1P15314 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Irf1P15314 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Irf1P15314 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Irf1P15314 CT025626.1-201ENSMUST00000223735 1455 ntBASIC13.31□□□□□ -0.28
Irf1P15314 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Irf1P15314 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Irf1P15314 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Irf1P15314 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC13.31□□□□□ -0.28
Irf1P15314 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Irf1P15314 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Irf1P15314 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Irf1P15314 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC13.31□□□□□ -0.28
Irf1P15314 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.31□□□□□ -0.28
Irf1P15314 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13.31□□□□□ -0.28
Irf1P15314 Dnal1-201ENSMUST00000046340 790 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Irf1P15314 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC13.31□□□□□ -0.28
Irf1P15314 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Irf1P15314 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Irf1P15314 Gm43195-201ENSMUST00000200614 2332 ntBASIC13.31□□□□□ -0.28
Irf1P15314 E430024P14Rik-202ENSMUST00000160177 2050 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Irf1P15314 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC13.31□□□□□ -0.28
Irf1P15314 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Irf1P15314 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Irf1P15314 Patz1-202ENSMUST00000093402 3173 ntTSL 2 BASIC13.31□□□□□ -0.28
Irf1P15314 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Irf1P15314 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC13.31□□□□□ -0.28
Irf1P15314 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Irf1P15314 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Irf1P15314 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 Thap12-201ENSMUST00000033009 3723 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC13.3□□□□□ -0.28
Irf1P15314 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 Aqp11-205ENSMUST00000206389 3737 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Irf1P15314 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.3□□□□□ -0.28
Irf1P15314 Nespas-202ENSMUST00000150276 1262 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 Gm25948-201ENSMUST00000175334 112 ntBASIC13.3□□□□□ -0.28
Irf1P15314 Gm22119-201ENSMUST00000175594 99 ntBASIC13.3□□□□□ -0.28
Irf1P15314 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.3□□□□□ -0.28
Irf1P15314 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Irf1P15314 2310001H17Rik-206ENSMUST00000205051 676 ntTSL 3 BASIC13.3□□□□□ -0.28
Irf1P15314 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.3□□□□□ -0.28
Irf1P15314 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC13.3□□□□□ -0.28
Irf1P15314 AC166341.4-201ENSMUST00000220625 123 ntBASIC13.3□□□□□ -0.28
Irf1P15314 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.3□□□□□ -0.28
Irf1P15314 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 Ccdc8-201ENSMUST00000094805 4809 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Irf1P15314 Syp-201ENSMUST00000069520 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Irf1P15314 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Irf1P15314 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Irf1P15314 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Irf1P15314 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Irf1P15314 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Irf1P15314 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Irf1P15314 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Irf1P15314 Osbpl10-201ENSMUST00000046627 1872 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Irf1P15314 Dido1-202ENSMUST00000087517 8723 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Irf1P15314 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Irf1P15314 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Irf1P15314 Kat8-201ENSMUST00000033070 1579 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Irf1P15314 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Irf1P15314 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Irf1P15314 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 37.1 ms