Protein–RNA interactions for Protein: P12850

Cxcl1, Growth-regulated alpha protein, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cxcl1P12850 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.94□□□□□ -0.5
Cxcl1P12850 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
Cxcl1P12850 Arhgap20-201ENSMUST00000065496 7161 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
Cxcl1P12850 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl1P12850 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl1P12850 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC11.93□□□□□ -0.5
Cxcl1P12850 Elmsan1-202ENSMUST00000110294 7156 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cxcl1P12850 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl1P12850 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl1P12850 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl1P12850 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl1P12850 Slc39a3-201ENSMUST00000059551 3680 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl1P12850 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl1P12850 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl1P12850 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC11.93□□□□□ -0.5
Cxcl1P12850 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
Cxcl1P12850 Gm8584-201ENSMUST00000171982 758 ntBASIC11.93□□□□□ -0.5
Cxcl1P12850 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl1P12850 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.93□□□□□ -0.5
Cxcl1P12850 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC11.93□□□□□ -0.5
Cxcl1P12850 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl1P12850 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl1P12850 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC11.93□□□□□ -0.5
Cxcl1P12850 Birc2-201ENSMUST00000054878 378 ntBASIC11.93□□□□□ -0.5
Cxcl1P12850 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC11.93□□□□□ -0.5
Cxcl1P12850 Rps4l-201ENSMUST00000071745 943 ntBASIC11.93□□□□□ -0.5
Cxcl1P12850 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC11.93□□□□□ -0.5
Cxcl1P12850 Asb16-201ENSMUST00000036467 2843 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl1P12850 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl1P12850 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl1P12850 Matn2-206ENSMUST00000228570 2798 ntBASIC11.93□□□□□ -0.5
Cxcl1P12850 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl1P12850 Tfap2a-202ENSMUST00000110193 2863 ntAPPRIS P3 TSL 1 (best) BASIC11.93□□□□□ -0.5
Cxcl1P12850 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cxcl1P12850 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cxcl1P12850 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC11.92□□□□□ -0.5
Cxcl1P12850 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC11.92□□□□□ -0.5
Cxcl1P12850 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC11.92□□□□□ -0.5
Cxcl1P12850 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC11.92□□□□□ -0.5
Cxcl1P12850 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC11.92□□□□□ -0.5
Cxcl1P12850 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.92□□□□□ -0.5
Cxcl1P12850 Gm27459-201ENSMUST00000184860 107 ntBASIC11.92□□□□□ -0.5
Cxcl1P12850 Gm2272-201ENSMUST00000194903 582 ntBASIC11.92□□□□□ -0.5
Cxcl1P12850 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Gm45631-201ENSMUST00000210318 1244 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Rbm34-201ENSMUST00000045994 3424 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC11.92□□□□□ -0.5
Cxcl1P12850 Dgke-201ENSMUST00000000285 5208 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cxcl1P12850 Tbc1d5-205ENSMUST00000224528 4764 ntAPPRIS ALT2 BASIC11.92□□□□□ -0.5
Cxcl1P12850 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Gm11405-201ENSMUST00000118689 1556 ntBASIC11.92□□□□□ -0.5
Cxcl1P12850 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Tcn2-204ENSMUST00000109990 1914 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC11.92□□□□□ -0.5
Cxcl1P12850 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC11.92□□□□□ -0.5
Cxcl1P12850 Teddm2-202ENSMUST00000123490 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Igf2os-203ENSMUST00000141681 4778 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Gm996-201ENSMUST00000114217 4881 ntAPPRIS P1 TSL 2 BASIC11.91□□□□□ -0.5
Cxcl1P12850 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.91□□□□□ -0.5
Cxcl1P12850 Sdhb-201ENSMUST00000010007 1142 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC11.91□□□□□ -0.5
Cxcl1P12850 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 2310061I04Rik-204ENSMUST00000148721 1293 ntAPPRIS P1 TSL 5 BASIC11.91□□□□□ -0.5
Cxcl1P12850 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC11.91□□□□□ -0.5
Cxcl1P12850 Gm34391-201ENSMUST00000203706 907 ntBASIC11.91□□□□□ -0.5
Cxcl1P12850 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC11.91□□□□□ -0.5
Cxcl1P12850 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Rnf144a-201ENSMUST00000020971 5164 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Cxcl1P12850 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.91□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 39.4 ms