Protein–RNA interactions for Protein: P10855

Ccl3, C-C motif chemokine 3, mousemouse

Predictions only

Length 92 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccl3P10855 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Shroom1-204ENSMUST00000109013 3312 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
Ccl3P10855 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.66□□□□□ -0.38
Ccl3P10855 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.66□□□□□ -0.38
Ccl3P10855 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Ift20-203ENSMUST00000128788 1141 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Rnase2b-201ENSMUST00000075648 759 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Ccl3P10855 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Tox3-201ENSMUST00000109621 3356 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Gm37305-201ENSMUST00000195714 4279 ntBASIC12.66□□□□□ -0.38
Ccl3P10855 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.66□□□□□ -0.38
Ccl3P10855 Six4-201ENSMUST00000043208 6402 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Akap1-201ENSMUST00000018572 3758 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Ccl3P10855 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccl3P10855 Fastk-203ENSMUST00000115043 3056 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl3P10855 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl3P10855 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl3P10855 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl3P10855 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl3P10855 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Ccl3P10855 Ldhal6b-201ENSMUST00000189788 1445 ntAPPRIS P1 BASIC12.65□□□□□ -0.38
Ccl3P10855 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl3P10855 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl3P10855 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl3P10855 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.65□□□□□ -0.38
Ccl3P10855 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.65□□□□□ -0.38
Ccl3P10855 AY702102-202ENSMUST00000194651 1173 ntBASIC12.65□□□□□ -0.38
Ccl3P10855 Gm43630-201ENSMUST00000201550 776 ntBASIC12.65□□□□□ -0.38
Ccl3P10855 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC12.65□□□□□ -0.38
Ccl3P10855 Rpl18-208ENSMUST00000211061 552 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccl3P10855 AC155258.1-201ENSMUST00000219303 253 ntBASIC12.65□□□□□ -0.38
Ccl3P10855 Kcnk9-201ENSMUST00000044624 1209 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl3P10855 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl3P10855 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC12.65□□□□□ -0.38
Ccl3P10855 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Ccl3P10855 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl3P10855 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.65□□□□□ -0.38
Ccl3P10855 Tgfa-201ENSMUST00000032066 4527 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl3P10855 Tmem132c-201ENSMUST00000119026 5134 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl3P10855 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC12.65□□□□□ -0.38
Ccl3P10855 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl3P10855 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC12.65□□□□□ -0.38
Ccl3P10855 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl3P10855 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Ccl3P10855 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccl3P10855 Runx2-203ENSMUST00000113572 6463 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccl3P10855 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Ccl3P10855 Adamts20-201ENSMUST00000035342 6027 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Ccl3P10855 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Fscn1-201ENSMUST00000031565 2675 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Nmi-202ENSMUST00000112705 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.64□□□□□ -0.39
Ccl3P10855 Pax5-206ENSMUST00000134968 969 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccl3P10855 Kctd17-202ENSMUST00000159771 986 ntAPPRIS ALT2 TSL 2 BASIC12.64□□□□□ -0.39
Ccl3P10855 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
Ccl3P10855 Ube2a-205ENSMUST00000201068 1298 ntTSL 5 BASIC12.64□□□□□ -0.39
Ccl3P10855 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.64□□□□□ -0.39
Ccl3P10855 Fau-201ENSMUST00000043074 574 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Ccl3P10855 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Lonrf3-201ENSMUST00000016383 2911 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC12.64□□□□□ -0.39
Ccl3P10855 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Ccl3P10855 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 AC114008.2-201ENSMUST00000227699 1347 ntBASIC12.63□□□□□ -0.39
Ccl3P10855 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 Rhpn1-202ENSMUST00000121137 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Ccl3P10855 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 61.5 ms