Protein–RNA interactions for Protein: P06320

T-cell receptor beta chain V region CTL-F3, mousemouse

Predictions only

Length 134 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
P06320 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Gm43056-201ENSMUST00000197865 2791 ntBASIC9.1□□□□□ -0.95
P06320 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
P06320 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC9.1□□□□□ -0.95
P06320 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Rapsn-201ENSMUST00000050323 1606 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
P06320 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC9.1□□□□□ -0.95
P06320 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC9.1□□□□□ -0.95
P06320 Gm17349-201ENSMUST00000163472 300 ntAPPRIS P1 TSL 5 BASIC9.1□□□□□ -0.95
P06320 Ffar2-203ENSMUST00000168528 1210 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Spata25-201ENSMUST00000017911 786 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC9.1□□□□□ -0.95
P06320 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Gm18622-201ENSMUST00000219361 595 ntBASIC9.1□□□□□ -0.95
P06320 Nudt16l1-201ENSMUST00000050881 1269 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Nat8f6-202ENSMUST00000174143 1571 ntAPPRIS P1 TSL 3 BASIC9.1□□□□□ -0.95
P06320 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Gtf3c4-201ENSMUST00000037117 6941 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Phrf1-202ENSMUST00000122143 4864 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC9.1□□□□□ -0.95
P06320 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC9.1□□□□□ -0.95
P06320 Wwtr1-201ENSMUST00000029380 4697 ntAPPRIS P3 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Lmbr1-202ENSMUST00000179191 4836 ntTSL 5 BASIC9.1□□□□□ -0.95
P06320 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Mfsd4b4-202ENSMUST00000178563 3523 ntTSL 5 BASIC9.1□□□□□ -0.95
P06320 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC9.1□□□□□ -0.95
P06320 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC9.1□□□□□ -0.95
P06320 Shisa9-201ENSMUST00000023138 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Six4-202ENSMUST00000175693 6817 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
P06320 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Sigirr-203ENSMUST00000209294 1612 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Gm12355-201ENSMUST00000104933 1311 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
P06320 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Rnf185-201ENSMUST00000064364 2906 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Spast-201ENSMUST00000024869 4672 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Adprhl1-205ENSMUST00000204916 5228 ntTSL 5 BASIC9.09□□□□□ -0.95
P06320 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Rbp3-201ENSMUST00000035695 5295 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Naa40-201ENSMUST00000025675 3275 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Izumo1r-204ENSMUST00000121116 726 ntTSL 2 BASIC9.09□□□□□ -0.95
P06320 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC9.09□□□□□ -0.95
P06320 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Rprl3-201ENSMUST00000157400 290 ntBASIC9.09□□□□□ -0.95
P06320 AC153794.1-201ENSMUST00000169148 126 ntBASIC9.09□□□□□ -0.95
P06320 Rsu1-209ENSMUST00000191959 720 ntTSL 3 BASIC9.09□□□□□ -0.95
P06320 Gm43767-201ENSMUST00000198933 381 ntBASIC9.09□□□□□ -0.95
P06320 Gm43799-201ENSMUST00000201845 579 ntBASIC9.09□□□□□ -0.95
P06320 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 1700012D14Rik-201ENSMUST00000209597 605 ntTSL 3 BASIC9.09□□□□□ -0.95
P06320 Ccdc182-201ENSMUST00000037268 1204 ntAPPRIS P1 BASIC9.09□□□□□ -0.95
P06320 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC9.09□□□□□ -0.95
P06320 Tfe3-211ENSMUST00000137467 3390 ntTSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC9.09□□□□□ -0.95
P06320 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC9.09□□□□□ -0.95
P06320 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Mfap3l-202ENSMUST00000160719 6335 ntAPPRIS P1 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Gm42748-201ENSMUST00000199354 2341 ntBASIC9.09□□□□□ -0.95
P06320 Kcnn2-205ENSMUST00000183850 3546 ntAPPRIS P2 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC9.09□□□□□ -0.95
P06320 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC9.09□□□□□ -0.96
P06320 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
P06320 AC157650.3-201ENSMUST00000225058 1476 ntBASIC9.08□□□□□ -0.96
P06320 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC9.08□□□□□ -0.96
P06320 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC9.08□□□□□ -0.96
P06320 Flnc-202ENSMUST00000101617 8939 ntAPPRIS ALT1 TSL 1 (best) BASIC9.08□□□□□ -0.96
P06320 Triobp-203ENSMUST00000109689 7187 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
P06320 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC9.08□□□□□ -0.96
P06320 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC9.08□□□□□ -0.96
P06320 C3-201ENSMUST00000024988 5136 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
P06320 Ankrd13c-201ENSMUST00000040787 3903 ntAPPRIS P1 TSL 5 BASIC9.08□□□□□ -0.96
P06320 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC9.08□□□□□ -0.96
P06320 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC9.08□□□□□ -0.96
P06320 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
P06320 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC9.08□□□□□ -0.96
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms