Protein–RNA interactions for Protein: P05213

Tuba1b, Tubulin alpha-1B chain, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tuba1bP05213 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Tuba1bP05213 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.41□□□□□ -0.26
Tuba1bP05213 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Nup88-202ENSMUST00000108530 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Tcp1-207ENSMUST00000143961 614 ntTSL 2 BASIC13.41□□□□□ -0.26
Tuba1bP05213 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.41□□□□□ -0.26
Tuba1bP05213 Gm27628-201ENSMUST00000184911 107 ntBASIC13.41□□□□□ -0.26
Tuba1bP05213 Gm20324-201ENSMUST00000186291 1118 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Gm37153-201ENSMUST00000193637 231 ntBASIC13.41□□□□□ -0.26
Tuba1bP05213 Gm45167-201ENSMUST00000208007 322 ntBASIC13.41□□□□□ -0.26
Tuba1bP05213 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.41□□□□□ -0.26
Tuba1bP05213 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC13.41□□□□□ -0.26
Tuba1bP05213 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.41□□□□□ -0.26
Tuba1bP05213 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Gm18244-201ENSMUST00000219747 1566 ntBASIC13.41□□□□□ -0.26
Tuba1bP05213 Arl6-202ENSMUST00000099646 1554 ntTSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.41□□□□□ -0.26
Tuba1bP05213 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.4□□□□□ -0.26
Tuba1bP05213 Hps1-208ENSMUST00000162004 2847 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Plcxd1-201ENSMUST00000086687 1346 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Hsph1-201ENSMUST00000074846 3240 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.4□□□□□ -0.26
Tuba1bP05213 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Tuba1bP05213 Kctd10-201ENSMUST00000001125 1026 ntAPPRIS ALT1 TSL 5 BASIC13.4□□□□□ -0.26
Tuba1bP05213 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC13.4□□□□□ -0.26
Tuba1bP05213 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC13.4□□□□□ -0.26
Tuba1bP05213 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.4□□□□□ -0.26
Tuba1bP05213 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tuba1bP05213 Gm10419-203ENSMUST00000197854 653 ntTSL 5 BASIC13.4□□□□□ -0.26
Tuba1bP05213 Gm19710-202ENSMUST00000200320 493 ntTSL 3 BASIC13.4□□□□□ -0.26
Tuba1bP05213 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC13.4□□□□□ -0.26
Tuba1bP05213 Gm18206-201ENSMUST00000207027 926 ntBASIC13.4□□□□□ -0.26
Tuba1bP05213 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC13.4□□□□□ -0.26
Tuba1bP05213 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC13.4□□□□□ -0.26
Tuba1bP05213 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.4□□□□□ -0.26
Tuba1bP05213 Zfp706-204ENSMUST00000226671 447 ntAPPRIS P1 BASIC13.4□□□□□ -0.26
Tuba1bP05213 AC159093.1-201ENSMUST00000227779 380 ntBASIC13.4□□□□□ -0.26
Tuba1bP05213 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Dmkn-203ENSMUST00000085688 1926 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.4□□□□□ -0.26
Tuba1bP05213 AC122301.2-201ENSMUST00000219020 1474 ntTSL 5 BASIC13.4□□□□□ -0.26
Tuba1bP05213 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Poli-202ENSMUST00000121674 2778 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Cbs-202ENSMUST00000078509 2403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.26
Tuba1bP05213 Mroh1-202ENSMUST00000096385 5268 ntAPPRIS P4 TSL 1 (best) BASIC13.4□□□□□ -0.27
Tuba1bP05213 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC13.4□□□□□ -0.27
Tuba1bP05213 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 A230087F16Rik-202ENSMUST00000181561 1303 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 Clgn-202ENSMUST00000109831 2293 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC13.39□□□□□ -0.27
Tuba1bP05213 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Tuba1bP05213 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 Rflna-203ENSMUST00000197746 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 Frmpd4-204ENSMUST00000112149 8456 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
Tuba1bP05213 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC13.39□□□□□ -0.27
Tuba1bP05213 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 AC140354.1-201ENSMUST00000219499 2425 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 H13-203ENSMUST00000109825 1063 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 Get4-202ENSMUST00000110878 1180 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.39□□□□□ -0.27
Tuba1bP05213 AW822252-206ENSMUST00000208904 237 ntBASIC13.39□□□□□ -0.27
Tuba1bP05213 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 Rhox6-201ENSMUST00000006362 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
Tuba1bP05213 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
Tuba1bP05213 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms