Protein–RNA interactions for Protein: P02463

Col4a1, Collagen alpha-1(IV) chain, mousemouse

Predictions only

Length 1,669 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a1P02463 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a1P02463 Gm16342-201ENSMUST00000124025 1025 ntBASIC17.39■□□□□ 0.37
Col4a1P02463 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC17.39■□□□□ 0.37
Col4a1P02463 Nme2-201ENSMUST00000021217 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a1P02463 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a1P02463 Gm45212-201ENSMUST00000205831 3403 ntBASIC17.39■□□□□ 0.37
Col4a1P02463 Sostdc1-201ENSMUST00000041407 1781 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a1P02463 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a1P02463 Gm9200-201ENSMUST00000118513 1354 ntBASIC17.39■□□□□ 0.37
Col4a1P02463 Kcnt1-203ENSMUST00000114172 5219 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a1P02463 Tnfaip2-201ENSMUST00000102745 3762 ntAPPRIS P2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a1P02463 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a1P02463 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC17.39■□□□□ 0.37
Col4a1P02463 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a1P02463 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC17.39■□□□□ 0.37
Col4a1P02463 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a1P02463 Rbm46-201ENSMUST00000048647 1794 ntAPPRIS P1 TSL 5 BASIC17.39■□□□□ 0.37
Col4a1P02463 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.39■□□□□ 0.37
Col4a1P02463 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC17.39■□□□□ 0.37
Col4a1P02463 1700069L16Rik-203ENSMUST00000162388 706 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a1P02463 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC17.39■□□□□ 0.37
Col4a1P02463 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a1P02463 Gm42442-201ENSMUST00000197951 1133 ntBASIC17.39■□□□□ 0.37
Col4a1P02463 Sobp-201ENSMUST00000040275 4980 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
Col4a1P02463 Nsun7-203ENSMUST00000201100 2775 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
Col4a1P02463 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Gm29676-201ENSMUST00000222396 1689 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC17.38■□□□□ 0.37
Col4a1P02463 Metap1d-201ENSMUST00000037210 1321 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Dixdc1-202ENSMUST00000117093 1613 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Cnbp-209ENSMUST00000204890 1614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Tagap1-201ENSMUST00000063683 2358 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.38■□□□□ 0.37
Col4a1P02463 Gm45784-201ENSMUST00000188360 142 ntBASIC17.38■□□□□ 0.37
Col4a1P02463 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC17.38■□□□□ 0.37
Col4a1P02463 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col4a1P02463 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC17.38■□□□□ 0.37
Col4a1P02463 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC17.38■□□□□ 0.37
Col4a1P02463 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC17.38■□□□□ 0.37
Col4a1P02463 Asb2-201ENSMUST00000021617 2690 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
Col4a1P02463 Gm13859-201ENSMUST00000119936 1423 ntBASIC17.37■□□□□ 0.37
Col4a1P02463 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a1P02463 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a1P02463 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a1P02463 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC17.37■□□□□ 0.37
Col4a1P02463 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a1P02463 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a1P02463 Fbxl12-205ENSMUST00000140702 1555 ntBASIC17.37■□□□□ 0.37
Col4a1P02463 Gm9946-202ENSMUST00000162741 1580 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a1P02463 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a1P02463 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC17.37■□□□□ 0.37
Col4a1P02463 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC17.37■□□□□ 0.37
Col4a1P02463 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a1P02463 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC17.37■□□□□ 0.37
Col4a1P02463 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a1P02463 Alkbh3-201ENSMUST00000040005 1228 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a1P02463 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a1P02463 Nf2-205ENSMUST00000109910 4720 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a1P02463 Atrip-201ENSMUST00000045011 2572 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a1P02463 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a1P02463 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a1P02463 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a1P02463 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
Col4a1P02463 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.37■□□□□ 0.37
Col4a1P02463 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Col4a1P02463 Washc1-201ENSMUST00000072383 2904 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Gm11814-201ENSMUST00000119515 929 ntBASIC17.36■□□□□ 0.37
Col4a1P02463 Grp-202ENSMUST00000173530 617 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
Col4a1P02463 Zbtb5-204ENSMUST00000180217 4708 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
Col4a1P02463 Ppp4r3a-201ENSMUST00000048305 4516 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Casd1-201ENSMUST00000015333 3961 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC17.36■□□□□ 0.37
Col4a1P02463 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Gabbr1-201ENSMUST00000025338 5248 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Col4a1P02463 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
Col4a1P02463 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 Zcchc2-202ENSMUST00000119166 6368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
Col4a1P02463 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
Retrieved 100 of 76,532 protein–RNA pairs in 30.4 ms