Protein–RNA interactions for Protein: O88874

Ccnk, Cyclin-K, mousemouse

Predictions only

Length 554 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CcnkO88874 1810030O07Rik-201ENSMUST00000060108 2699 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcnkO88874 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CcnkO88874 Btn1a1-202ENSMUST00000110434 1077 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CcnkO88874 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC12.84□□□□□ -0.35
CcnkO88874 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CcnkO88874 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC12.84□□□□□ -0.35
CcnkO88874 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC12.84□□□□□ -0.35
CcnkO88874 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcnkO88874 Mir8098-201ENSMUST00000184011 137 ntBASIC12.84□□□□□ -0.35
CcnkO88874 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CcnkO88874 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CcnkO88874 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CcnkO88874 Gm30437-201ENSMUST00000206086 1201 ntBASIC12.84□□□□□ -0.35
CcnkO88874 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC12.84□□□□□ -0.35
CcnkO88874 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcnkO88874 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.84□□□□□ -0.35
CcnkO88874 Dnm1l-201ENSMUST00000023477 4017 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcnkO88874 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcnkO88874 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
CcnkO88874 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcnkO88874 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.84□□□□□ -0.35
CcnkO88874 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcnkO88874 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcnkO88874 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcnkO88874 R3hdm2-212ENSMUST00000166820 4281 ntAPPRIS P2 TSL 5 BASIC12.84□□□□□ -0.35
CcnkO88874 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC12.84□□□□□ -0.35
CcnkO88874 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
CcnkO88874 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcnkO88874 4933415F23Rik-201ENSMUST00000073179 1781 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CcnkO88874 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
CcnkO88874 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
CcnkO88874 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.35
CcnkO88874 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CcnkO88874 Gm45638-201ENSMUST00000211507 2878 ntBASIC12.83□□□□□ -0.35
CcnkO88874 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CcnkO88874 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.35
CcnkO88874 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.35
CcnkO88874 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC12.83□□□□□ -0.35
CcnkO88874 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.83□□□□□ -0.36
CcnkO88874 Kcnd3-203ENSMUST00000118360 2668 ntAPPRIS P4 TSL 5 BASIC12.83□□□□□ -0.36
CcnkO88874 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.83□□□□□ -0.36
CcnkO88874 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 Gm23547-201ENSMUST00000158210 271 ntBASIC12.83□□□□□ -0.36
CcnkO88874 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC12.83□□□□□ -0.36
CcnkO88874 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 Gm5253-201ENSMUST00000187104 1025 ntBASIC12.83□□□□□ -0.36
CcnkO88874 Gm28659-201ENSMUST00000188013 759 ntBASIC12.83□□□□□ -0.36
CcnkO88874 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC12.83□□□□□ -0.36
CcnkO88874 AC151836.1-202ENSMUST00000226259 753 ntBASIC12.83□□□□□ -0.36
CcnkO88874 CT009510.1-201ENSMUST00000227972 270 ntBASIC12.83□□□□□ -0.36
CcnkO88874 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC12.83□□□□□ -0.36
CcnkO88874 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CcnkO88874 Gm43056-201ENSMUST00000197865 2791 ntBASIC12.83□□□□□ -0.36
CcnkO88874 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC12.83□□□□□ -0.36
CcnkO88874 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 Pank1-201ENSMUST00000036584 3460 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.83□□□□□ -0.36
CcnkO88874 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC12.83□□□□□ -0.36
CcnkO88874 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC12.83□□□□□ -0.36
CcnkO88874 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 Gm43677-201ENSMUST00000198098 2378 ntBASIC12.83□□□□□ -0.36
CcnkO88874 Cmpk2-201ENSMUST00000020969 3200 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
CcnkO88874 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Gm34419-201ENSMUST00000211383 1387 ntTSL 5 BASIC12.82□□□□□ -0.36
CcnkO88874 Hnrnph1-203ENSMUST00000109142 2427 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC12.82□□□□□ -0.36
CcnkO88874 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Gm11452-201ENSMUST00000122376 690 ntBASIC12.82□□□□□ -0.36
CcnkO88874 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC12.82□□□□□ -0.36
CcnkO88874 Emp3-202ENSMUST00000164119 784 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
CcnkO88874 Gm5682-201ENSMUST00000173402 505 ntBASIC12.82□□□□□ -0.36
CcnkO88874 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
CcnkO88874 Gm6550-201ENSMUST00000187574 993 ntBASIC12.82□□□□□ -0.36
CcnkO88874 Gm9682-201ENSMUST00000197505 556 ntBASIC12.82□□□□□ -0.36
CcnkO88874 Gm5864-201ENSMUST00000202263 970 ntBASIC12.82□□□□□ -0.36
CcnkO88874 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC12.82□□□□□ -0.36
CcnkO88874 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 26.8 ms