Protein–RNA interactions for Protein: O88545

Cops6, COP9 signalosome complex subunit 6, mousemouse

Predictions only

Length 324 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops6O88545 Trem1-202ENSMUST00000113251 2077 ntTSL 1 (best) BASIC17.52■□□□□ 0.39
Cops6O88545 Adcy7-203ENSMUST00000169037 5198 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cops6O88545 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.52■□□□□ 0.39
Cops6O88545 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.39
Cops6O88545 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cops6O88545 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cops6O88545 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.51■□□□□ 0.39
Cops6O88545 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC17.51■□□□□ 0.39
Cops6O88545 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cops6O88545 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
Cops6O88545 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cops6O88545 Chd1l-201ENSMUST00000029730 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cops6O88545 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cops6O88545 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cops6O88545 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cops6O88545 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC17.51■□□□□ 0.39
Cops6O88545 Gm11478-201ENSMUST00000117851 599 ntBASIC17.51■□□□□ 0.39
Cops6O88545 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cops6O88545 Gsg1l2-202ENSMUST00000181566 1158 ntAPPRIS P1 TSL 5 BASIC17.51■□□□□ 0.39
Cops6O88545 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cops6O88545 Ighv8-14-201ENSMUST00000196781 358 ntBASIC17.51■□□□□ 0.39
Cops6O88545 Sftpa1-201ENSMUST00000022314 851 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cops6O88545 AC102291.3-201ENSMUST00000226566 405 ntBASIC17.51■□□□□ 0.39
Cops6O88545 Top3b-201ENSMUST00000023465 3073 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cops6O88545 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cops6O88545 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cops6O88545 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cops6O88545 Nudt17-201ENSMUST00000029742 1039 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
Cops6O88545 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cops6O88545 Rpl13a-ps1-201ENSMUST00000071866 612 ntAPPRIS P1 BASIC17.51■□□□□ 0.39
Cops6O88545 Gm14451-201ENSMUST00000121581 1542 ntBASIC17.51■□□□□ 0.39
Cops6O88545 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cops6O88545 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cops6O88545 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
Cops6O88545 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cops6O88545 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cops6O88545 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cops6O88545 Ccdc106-202ENSMUST00000108571 1318 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cops6O88545 Cdadc1-204ENSMUST00000171683 1892 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cops6O88545 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cops6O88545 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC17.5■□□□□ 0.39
Cops6O88545 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cops6O88545 Vopp1-204ENSMUST00000145608 4590 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cops6O88545 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Cops6O88545 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cops6O88545 3110053B16Rik-204ENSMUST00000145605 575 ntBASIC17.5■□□□□ 0.39
Cops6O88545 Gm4804-201ENSMUST00000182234 999 ntBASIC17.5■□□□□ 0.39
Cops6O88545 Gm5354-201ENSMUST00000182417 973 ntBASIC17.5■□□□□ 0.39
Cops6O88545 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
Cops6O88545 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cops6O88545 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
Cops6O88545 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cops6O88545 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cops6O88545 Csnk2a2-201ENSMUST00000056919 3773 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cops6O88545 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cops6O88545 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
Cops6O88545 E530011L22Rik-201ENSMUST00000181325 5282 ntBASIC17.5■□□□□ 0.39
Cops6O88545 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
Cops6O88545 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cops6O88545 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cops6O88545 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cops6O88545 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cops6O88545 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cops6O88545 Ngf-202ENSMUST00000106925 1187 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cops6O88545 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
Cops6O88545 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
Cops6O88545 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cops6O88545 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cops6O88545 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
Cops6O88545 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cops6O88545 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cops6O88545 Ifngr2-201ENSMUST00000023687 3254 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cops6O88545 Ccdc137-201ENSMUST00000058370 2778 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cops6O88545 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.49■□□□□ 0.39
Cops6O88545 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cops6O88545 Gm10584-201ENSMUST00000207036 2628 ntBASIC17.49■□□□□ 0.39
Cops6O88545 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
Cops6O88545 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cops6O88545 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Cops6O88545 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC17.48■□□□□ 0.39
Cops6O88545 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC17.48■□□□□ 0.39
Cops6O88545 Tnks-201ENSMUST00000033929 9163 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC17.48■□□□□ 0.39
Cops6O88545 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cops6O88545 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cops6O88545 Gm11918-201ENSMUST00000121660 179 ntBASIC17.48■□□□□ 0.39
Cops6O88545 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Cops6O88545 Flg-208ENSMUST00000180308 1076 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Cops6O88545 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC17.48■□□□□ 0.39
Cops6O88545 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC17.48■□□□□ 0.39
Cops6O88545 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC17.48■□□□□ 0.39
Cops6O88545 Gm44608-201ENSMUST00000206827 855 ntBASIC17.48■□□□□ 0.39
Cops6O88545 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC17.48■□□□□ 0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.4 ms