Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Gm2420-202ENSMUST00000202224 2249 ntBASIC13.3□□□□□ -0.28
Cops4O88544 Gm13418-201ENSMUST00000119097 944 ntBASIC13.3□□□□□ -0.28
Cops4O88544 Gm9103-201ENSMUST00000119371 405 ntBASIC13.3□□□□□ -0.28
Cops4O88544 Gm44930-202ENSMUST00000208733 689 ntTSL 5 BASIC13.3□□□□□ -0.28
Cops4O88544 Dcdc2c-201ENSMUST00000020963 1041 ntTSL 5 BASIC13.3□□□□□ -0.28
Cops4O88544 AC159301.1-201ENSMUST00000225130 1182 ntBASIC13.3□□□□□ -0.28
Cops4O88544 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops4O88544 Gm19461-205ENSMUST00000191207 2566 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cops4O88544 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.3□□□□□ -0.28
Cops4O88544 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops4O88544 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops4O88544 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cops4O88544 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Cops4O88544 Wbp11-201ENSMUST00000116514 2739 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops4O88544 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops4O88544 Atp2a3-203ENSMUST00000108485 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops4O88544 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Cops4O88544 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cops4O88544 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Cops4O88544 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC13.3□□□□□ -0.28
Cops4O88544 Gm43364-201ENSMUST00000196046 3274 ntBASIC13.3□□□□□ -0.28
Cops4O88544 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.29□□□□□ -0.28
Cops4O88544 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Clns1a-201ENSMUST00000026506 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Diaph1-204ENSMUST00000115631 5741 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cops4O88544 Traf5-201ENSMUST00000085573 1964 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cops4O88544 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cops4O88544 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Cct6a-202ENSMUST00000201414 2454 ntTSL 5 BASIC13.29□□□□□ -0.28
Cops4O88544 Cd82-202ENSMUST00000099696 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.29□□□□□ -0.28
Cops4O88544 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.29□□□□□ -0.28
Cops4O88544 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC13.29□□□□□ -0.28
Cops4O88544 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.29□□□□□ -0.28
Cops4O88544 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC13.29□□□□□ -0.28
Cops4O88544 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Cops4O88544 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cops4O88544 Disp1-205ENSMUST00000195372 4901 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Adat3-201ENSMUST00000178231 4516 ntAPPRIS P1 TSL 2 BASIC13.29□□□□□ -0.28
Cops4O88544 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Cit-203ENSMUST00000112008 6087 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Cops4O88544 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC13.29□□□□□ -0.28
Cops4O88544 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 AI661453-201ENSMUST00000037701 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Rhoj-201ENSMUST00000055390 2350 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Cops4O88544 Gm29530-201ENSMUST00000187556 1956 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Cops4O88544 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.28□□□□□ -0.28
Cops4O88544 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Ssc5d-201ENSMUST00000057612 4348 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Tfpt-202ENSMUST00000108641 1166 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Gm44357-201ENSMUST00000195897 142 ntBASIC13.28□□□□□ -0.28
Cops4O88544 Gm19658-201ENSMUST00000196231 138 ntBASIC13.28□□□□□ -0.28
Cops4O88544 Gm44367-201ENSMUST00000196836 138 ntBASIC13.28□□□□□ -0.28
Cops4O88544 Gm44350-201ENSMUST00000197197 138 ntBASIC13.28□□□□□ -0.28
Cops4O88544 Gm44390-201ENSMUST00000197533 144 ntBASIC13.28□□□□□ -0.28
Cops4O88544 Gm44313-201ENSMUST00000198018 138 ntBASIC13.28□□□□□ -0.28
Cops4O88544 Gm44486-201ENSMUST00000198508 138 ntBASIC13.28□□□□□ -0.28
Cops4O88544 Gm44314-201ENSMUST00000199263 138 ntBASIC13.28□□□□□ -0.28
Cops4O88544 Gm44394-201ENSMUST00000199558 138 ntBASIC13.28□□□□□ -0.28
Cops4O88544 Gm44484-201ENSMUST00000199873 138 ntBASIC13.28□□□□□ -0.28
Cops4O88544 Gm44466-201ENSMUST00000200264 138 ntBASIC13.28□□□□□ -0.28
Cops4O88544 Gm44359-201ENSMUST00000200671 138 ntBASIC13.28□□□□□ -0.28
Cops4O88544 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.28□□□□□ -0.28
Cops4O88544 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Krtap19-3-201ENSMUST00000075284 526 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Cops4O88544 Ska1-201ENSMUST00000040188 2669 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Gm37500-201ENSMUST00000192059 1443 ntBASIC13.28□□□□□ -0.28
Cops4O88544 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Otud4-203ENSMUST00000173286 7213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.28□□□□□ -0.28
Cops4O88544 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC13.28□□□□□ -0.28
Cops4O88544 Zbtb39-201ENSMUST00000054287 5960 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Cops4O88544 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC13.28□□□□□ -0.28
Cops4O88544 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC13.28□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms