Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Klhdc3-201ENSMUST00000071841 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Msantd3-202ENSMUST00000064807 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
Vti1bO88384 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Gm9727-201ENSMUST00000161387 555 ntBASIC13.75□□□□□ -0.21
Vti1bO88384 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC13.75□□□□□ -0.21
Vti1bO88384 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.75□□□□□ -0.21
Vti1bO88384 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC13.75□□□□□ -0.21
Vti1bO88384 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.75□□□□□ -0.21
Vti1bO88384 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Stk33-202ENSMUST00000106745 2410 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Zkscan17-201ENSMUST00000013262 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Aim2-202ENSMUST00000147604 2839 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
Vti1bO88384 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.75□□□□□ -0.21
Vti1bO88384 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC13.74□□□□□ -0.21
Vti1bO88384 Gm28182-201ENSMUST00000188354 2477 ntBASIC13.74□□□□□ -0.21
Vti1bO88384 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13.74□□□□□ -0.21
Vti1bO88384 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.74□□□□□ -0.21
Vti1bO88384 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Thap7-201ENSMUST00000100125 1248 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Nnat-202ENSMUST00000109526 1213 ntAPPRIS P4 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Gm13597-201ENSMUST00000121239 375 ntBASIC13.74□□□□□ -0.21
Vti1bO88384 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC13.74□□□□□ -0.21
Vti1bO88384 Zfp125-202ENSMUST00000144811 704 ntTSL 5 BASIC13.74□□□□□ -0.21
Vti1bO88384 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vti1bO88384 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Col9a2-201ENSMUST00000030372 2924 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Bcl2-201ENSMUST00000112751 7191 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.74□□□□□ -0.21
Vti1bO88384 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
Vti1bO88384 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
Vti1bO88384 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC13.73□□□□□ -0.21
Vti1bO88384 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC13.73□□□□□ -0.21
Vti1bO88384 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC13.73□□□□□ -0.21
Vti1bO88384 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13.73□□□□□ -0.21
Vti1bO88384 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Mxra8os-201ENSMUST00000097740 687 ntBASIC13.73□□□□□ -0.21
Vti1bO88384 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.73□□□□□ -0.21
Vti1bO88384 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC13.73□□□□□ -0.21
Vti1bO88384 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.73□□□□□ -0.21
Vti1bO88384 Tspan32-204ENSMUST00000105923 1499 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC13.73□□□□□ -0.21
Vti1bO88384 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.73□□□□□ -0.21
Vti1bO88384 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC13.72□□□□□ -0.21
Vti1bO88384 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Vti1bO88384 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 43.3 ms