Protein–RNA interactions for Protein: O88322

Nid2, Nidogen-2, mousemouse

Predictions only

Length 1,403 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nid2O88322 Gm16177-201ENSMUST00000120728 718 ntBASIC18.49■□□□□ 0.55
Nid2O88322 Gm8801-201ENSMUST00000173255 1064 ntBASIC18.49■□□□□ 0.55
Nid2O88322 Proscos-202ENSMUST00000178990 666 ntBASIC18.49■□□□□ 0.55
Nid2O88322 Gm38223-201ENSMUST00000194484 695 ntBASIC18.49■□□□□ 0.55
Nid2O88322 9430007M09Rik-201ENSMUST00000201947 804 ntBASIC18.49■□□□□ 0.55
Nid2O88322 Gm42303-201ENSMUST00000209960 1170 ntTSL 5 BASIC18.49■□□□□ 0.55
Nid2O88322 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
Nid2O88322 Gm9823-201ENSMUST00000051212 327 ntBASIC18.49■□□□□ 0.55
Nid2O88322 Rpl10l-201ENSMUST00000081908 1023 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nid2O88322 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
Nid2O88322 AC153938.1-201ENSMUST00000220354 1425 ntTSL 5 BASIC18.48■□□□□ 0.55
Nid2O88322 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nid2O88322 Gm14451-201ENSMUST00000121581 1542 ntBASIC18.48■□□□□ 0.55
Nid2O88322 Spcs2-210ENSMUST00000209032 1610 ntTSL 5 BASIC18.48■□□□□ 0.55
Nid2O88322 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nid2O88322 Wt1-201ENSMUST00000111098 2395 ntTSL 5 BASIC18.48■□□□□ 0.55
Nid2O88322 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nid2O88322 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nid2O88322 Ss18-203ENSMUST00000092041 2997 ntAPPRIS ALT1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nid2O88322 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nid2O88322 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nid2O88322 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nid2O88322 Rhcg-201ENSMUST00000032766 2090 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nid2O88322 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nid2O88322 Gm9109-201ENSMUST00000120254 1405 ntBASIC18.48■□□□□ 0.55
Nid2O88322 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nid2O88322 Gm14730-201ENSMUST00000122378 1045 ntBASIC18.48■□□□□ 0.55
Nid2O88322 Gm22331-201ENSMUST00000158066 136 ntBASIC18.48■□□□□ 0.55
Nid2O88322 Mir8109-201ENSMUST00000184375 117 ntBASIC18.48■□□□□ 0.55
Nid2O88322 Gm7498-201ENSMUST00000203282 1084 ntBASIC18.48■□□□□ 0.55
Nid2O88322 Svip-203ENSMUST00000209193 487 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nid2O88322 Reep1-202ENSMUST00000212631 953 ntTSL 5 BASIC18.48■□□□□ 0.55
Nid2O88322 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nid2O88322 Polr2e-201ENSMUST00000004786 1148 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
Nid2O88322 Coro6-203ENSMUST00000079770 1298 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
Nid2O88322 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nid2O88322 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nid2O88322 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nid2O88322 Dnajb5-201ENSMUST00000037872 3291 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Nid2O88322 Cdh2-201ENSMUST00000025166 4843 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nid2O88322 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC18.47■□□□□ 0.55
Nid2O88322 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nid2O88322 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC18.47■□□□□ 0.55
Nid2O88322 Gm13834-201ENSMUST00000123757 137 ntTSL 3 BASIC18.47■□□□□ 0.55
Nid2O88322 Gm8810-201ENSMUST00000172895 754 ntBASIC18.47■□□□□ 0.55
Nid2O88322 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nid2O88322 Ambp-201ENSMUST00000030041 1268 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nid2O88322 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nid2O88322 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nid2O88322 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC18.47■□□□□ 0.55
Nid2O88322 Dcaf17-201ENSMUST00000064141 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nid2O88322 Zfp362-201ENSMUST00000071108 2674 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
Nid2O88322 Tmem94-202ENSMUST00000103033 5238 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
Nid2O88322 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nid2O88322 AC168058.1-201ENSMUST00000219521 2282 ntBASIC18.46■□□□□ 0.55
Nid2O88322 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC18.46■□□□□ 0.55
Nid2O88322 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC18.46■□□□□ 0.55
Nid2O88322 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nid2O88322 Trim26-202ENSMUST00000123715 1406 ntTSL 5 BASIC18.46■□□□□ 0.55
Nid2O88322 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nid2O88322 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC18.46■□□□□ 0.55
Nid2O88322 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC18.46■□□□□ 0.55
Nid2O88322 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nid2O88322 Arpc3-203ENSMUST00000111713 708 ntTSL 3 BASIC18.46■□□□□ 0.55
Nid2O88322 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC18.46■□□□□ 0.55
Nid2O88322 Gm26894-201ENSMUST00000180828 1134 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
Nid2O88322 Gm4959-201ENSMUST00000197271 1044 ntBASIC18.46■□□□□ 0.55
Nid2O88322 Wfdc1-202ENSMUST00000212901 921 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nid2O88322 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
Nid2O88322 Carlr-201ENSMUST00000181515 2574 ntBASIC18.46■□□□□ 0.55
Nid2O88322 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Nid2O88322 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Nid2O88322 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
Nid2O88322 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nid2O88322 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nid2O88322 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nid2O88322 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nid2O88322 Itga6-201ENSMUST00000028522 4310 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nid2O88322 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nid2O88322 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nid2O88322 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nid2O88322 Litaf-202ENSMUST00000117360 763 ntAPPRIS P1 TSL 3 BASIC18.45■□□□□ 0.54
Nid2O88322 Tmem219-203ENSMUST00000120007 1087 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nid2O88322 Rps2-ps9-201ENSMUST00000121414 817 ntBASIC18.45■□□□□ 0.54
Nid2O88322 Egfl7-208ENSMUST00000149789 683 ntTSL 3 BASIC18.45■□□□□ 0.54
Nid2O88322 Gm6152-201ENSMUST00000151704 340 ntBASIC18.45■□□□□ 0.54
Nid2O88322 Gm2639-201ENSMUST00000156881 1297 ntBASIC18.45■□□□□ 0.54
Nid2O88322 Calhm3-201ENSMUST00000178630 1044 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
Nid2O88322 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nid2O88322 Gm18827-201ENSMUST00000188341 790 ntBASIC18.45■□□□□ 0.54
Nid2O88322 Gm43818-201ENSMUST00000200605 466 ntBASIC18.45■□□□□ 0.54
Nid2O88322 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nid2O88322 Spo11-202ENSMUST00000109125 1591 ntAPPRIS ALT1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nid2O88322 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nid2O88322 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nid2O88322 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nid2O88322 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nid2O88322 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
Nid2O88322 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
Nid2O88322 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
Retrieved 100 of 76,532 protein–RNA pairs in 19.7 ms