Protein–RNA interactions for Protein: O70481

Ubr1, E3 ubiquitin-protein ligase UBR1, mousemouse

Predictions only

Length 1,757 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ubr1O70481 Zkscan14-203ENSMUST00000198959 2243 ntBASIC18.35■□□□□ 0.53
Ubr1O70481 3110009E18Rik-203ENSMUST00000112644 488 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC18.35■□□□□ 0.53
Ubr1O70481 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC18.35■□□□□ 0.53
Ubr1O70481 Gm27514-201ENSMUST00000183692 110 ntBASIC18.35■□□□□ 0.53
Ubr1O70481 Mir6420-201ENSMUST00000185032 102 ntBASIC18.35■□□□□ 0.53
Ubr1O70481 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC18.35■□□□□ 0.53
Ubr1O70481 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC18.35■□□□□ 0.53
Ubr1O70481 Dmac1-201ENSMUST00000030103 741 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Gm10478-201ENSMUST00000084451 396 ntBASIC18.35■□□□□ 0.53
Ubr1O70481 Gm10570-201ENSMUST00000097865 513 ntAPPRIS P1 BASIC18.35■□□□□ 0.53
Ubr1O70481 Mrpl58-209ENSMUST00000153983 2596 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
Ubr1O70481 Haus7-201ENSMUST00000033737 1380 ntAPPRIS P4 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubr1O70481 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubr1O70481 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ubr1O70481 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubr1O70481 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubr1O70481 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubr1O70481 Tmbim6-201ENSMUST00000023749 2452 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubr1O70481 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC18.34■□□□□ 0.53
Ubr1O70481 Gm38223-201ENSMUST00000194484 695 ntBASIC18.34■□□□□ 0.53
Ubr1O70481 9130604C24Rik-201ENSMUST00000197965 956 ntBASIC18.34■□□□□ 0.53
Ubr1O70481 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
Ubr1O70481 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubr1O70481 Snap91-202ENSMUST00000074468 4336 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ubr1O70481 Trim67-201ENSMUST00000041106 5694 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubr1O70481 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC18.34■□□□□ 0.53
Ubr1O70481 Rbbp7-201ENSMUST00000033720 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubr1O70481 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubr1O70481 1700029H14Rik-205ENSMUST00000187391 1408 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubr1O70481 Prss47-204ENSMUST00000222769 1406 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ubr1O70481 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubr1O70481 Ankra2-208ENSMUST00000226100 1476 ntBASIC18.34■□□□□ 0.53
Ubr1O70481 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
Ubr1O70481 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Ubr1O70481 Uqcrq-201ENSMUST00000061326 1521 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ubr1O70481 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ubr1O70481 Trp53i11-201ENSMUST00000090554 2654 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ubr1O70481 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ubr1O70481 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ubr1O70481 Supt5-208ENSMUST00000209141 3755 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ubr1O70481 Cep57-201ENSMUST00000034398 2523 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
Ubr1O70481 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
Ubr1O70481 Gm8810-201ENSMUST00000172895 754 ntBASIC18.33■□□□□ 0.53
Ubr1O70481 Myl10-202ENSMUST00000196068 911 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ubr1O70481 Myl10-203ENSMUST00000196436 598 ntTSL 3 BASIC18.33■□□□□ 0.53
Ubr1O70481 Myl10-204ENSMUST00000197186 607 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
Ubr1O70481 Gm11960-202ENSMUST00000181063 2858 ntBASIC18.33■□□□□ 0.52
Ubr1O70481 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ubr1O70481 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
Ubr1O70481 Acbd5-203ENSMUST00000114526 3725 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ubr1O70481 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC18.33■□□□□ 0.52
Ubr1O70481 Zfp316-201ENSMUST00000051665 3054 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
Ubr1O70481 Dkk1-201ENSMUST00000025803 2427 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubr1O70481 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ubr1O70481 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ubr1O70481 Gm44780-201ENSMUST00000205409 581 ntTSL 3 BASIC18.32■□□□□ 0.52
Ubr1O70481 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubr1O70481 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ubr1O70481 Fmnl2-203ENSMUST00000090952 5414 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ubr1O70481 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubr1O70481 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC18.32■□□□□ 0.52
Ubr1O70481 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubr1O70481 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
Ubr1O70481 Nectin1-201ENSMUST00000034510 5653 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubr1O70481 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ubr1O70481 Gm12742-201ENSMUST00000117326 410 ntBASIC18.32■□□□□ 0.52
Ubr1O70481 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
Ubr1O70481 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC18.32■□□□□ 0.52
Ubr1O70481 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubr1O70481 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC18.32■□□□□ 0.52
Ubr1O70481 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC18.32■□□□□ 0.52
Ubr1O70481 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC18.32■□□□□ 0.52
Ubr1O70481 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubr1O70481 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubr1O70481 Slc25a54-201ENSMUST00000029478 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubr1O70481 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
Ubr1O70481 Gm13199-201ENSMUST00000071016 747 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubr1O70481 Prkar2a-201ENSMUST00000035220 4965 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
Ubr1O70481 Tle4-201ENSMUST00000052011 4555 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubr1O70481 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ubr1O70481 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubr1O70481 Gm38102-201ENSMUST00000192791 1935 ntBASIC18.31■□□□□ 0.52
Ubr1O70481 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubr1O70481 Nek2-201ENSMUST00000027931 3227 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubr1O70481 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubr1O70481 Tbx6-202ENSMUST00000172352 1529 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ubr1O70481 Gm7553-201ENSMUST00000185805 1426 ntBASIC18.31■□□□□ 0.52
Ubr1O70481 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubr1O70481 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubr1O70481 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC18.31■□□□□ 0.52
Ubr1O70481 Agtpbp1-213ENSMUST00000167096 508 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
Ubr1O70481 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC18.31■□□□□ 0.52
Ubr1O70481 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubr1O70481 Fkbp7-201ENSMUST00000002809 860 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubr1O70481 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
Ubr1O70481 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubr1O70481 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubr1O70481 1700066M21Rik-201ENSMUST00000042734 3008 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
Ubr1O70481 Uso1-201ENSMUST00000031355 3898 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms