Protein–RNA interactions for Protein: O70400

Pdlim1, PDZ and LIM domain protein 1, mousemouse

Predictions only

Length 327 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim1O70400 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Pdlim1O70400 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC14.22□□□□□ -0.13
Pdlim1O70400 Gm13616-201ENSMUST00000120600 222 ntBASIC14.22□□□□□ -0.13
Pdlim1O70400 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pdlim1O70400 Gm25144-201ENSMUST00000179561 110 ntBASIC14.22□□□□□ -0.13
Pdlim1O70400 Gm25352-201ENSMUST00000179815 110 ntBASIC14.22□□□□□ -0.13
Pdlim1O70400 Gm28630-201ENSMUST00000187806 498 ntBASIC14.22□□□□□ -0.13
Pdlim1O70400 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC14.22□□□□□ -0.13
Pdlim1O70400 Gm45453-201ENSMUST00000211758 853 ntBASIC14.22□□□□□ -0.13
Pdlim1O70400 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC14.22□□□□□ -0.13
Pdlim1O70400 Dad1-201ENSMUST00000022781 878 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim1O70400 Appl1-201ENSMUST00000036570 7642 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim1O70400 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim1O70400 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim1O70400 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim1O70400 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pdlim1O70400 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim1O70400 Hacd4-201ENSMUST00000030221 2089 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim1O70400 Slc43a1-203ENSMUST00000111625 2487 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim1O70400 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Pdlim1O70400 Usp33-202ENSMUST00000117492 3886 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim1O70400 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim1O70400 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim1O70400 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Pdlim1O70400 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Pdlim1O70400 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 Zfyve19-202ENSMUST00000102519 1505 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 Ablim3-201ENSMUST00000049378 4532 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 Nr2f1-202ENSMUST00000125176 841 ntTSL 5 BASIC14.21□□□□□ -0.13
Pdlim1O70400 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC14.21□□□□□ -0.13
Pdlim1O70400 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC14.21□□□□□ -0.13
Pdlim1O70400 Gm22175-201ENSMUST00000175007 78 ntBASIC14.21□□□□□ -0.13
Pdlim1O70400 Gm27631-201ENSMUST00000184163 466 ntBASIC14.21□□□□□ -0.13
Pdlim1O70400 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 Prok2-204ENSMUST00000203738 695 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC14.21□□□□□ -0.13
Pdlim1O70400 Tmem38a-203ENSMUST00000212763 882 ntTSL 3 BASIC14.21□□□□□ -0.13
Pdlim1O70400 Krtap19-4-201ENSMUST00000051103 304 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Pdlim1O70400 Fam159a-201ENSMUST00000053157 593 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Pdlim1O70400 Gnb4-201ENSMUST00000108234 2510 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Pdlim1O70400 Ltv1-201ENSMUST00000019950 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdlim1O70400 4933421O10Rik-201ENSMUST00000155691 3847 ntTSL 1 (best) BASIC14.21□□□□□ -0.14
Pdlim1O70400 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdlim1O70400 Efr3b-201ENSMUST00000111178 6547 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.14
Pdlim1O70400 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Pdlim1O70400 Arhgef2-223ENSMUST00000176804 3086 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.14
Pdlim1O70400 BC001981-202ENSMUST00000191393 1545 ntBASIC14.2□□□□□ -0.14
Pdlim1O70400 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pdlim1O70400 Slc30a5-201ENSMUST00000067246 3179 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Gpr88-201ENSMUST00000090473 3469 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Ptger1-201ENSMUST00000019608 4694 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Gm45630-201ENSMUST00000210243 1911 ntBASIC14.2□□□□□ -0.14
Pdlim1O70400 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Styxl1-207ENSMUST00000177559 1236 ntAPPRIS P1 TSL 5 BASIC14.2□□□□□ -0.14
Pdlim1O70400 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Gm42854-201ENSMUST00000201262 722 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC14.2□□□□□ -0.14
Pdlim1O70400 AC090659.2-201ENSMUST00000225378 1186 ntBASIC14.2□□□□□ -0.14
Pdlim1O70400 Rgs10-201ENSMUST00000033133 880 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Npb-201ENSMUST00000061309 418 ntTSL 3 BASIC14.2□□□□□ -0.14
Pdlim1O70400 Cyhr1-201ENSMUST00000066677 1163 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
Pdlim1O70400 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC14.2□□□□□ -0.14
Pdlim1O70400 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Bicc1-201ENSMUST00000014473 3231 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 S100pbp-204ENSMUST00000106061 4426 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC14.2□□□□□ -0.14
Pdlim1O70400 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
Pdlim1O70400 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.19□□□□□ -0.14
Pdlim1O70400 Tubg2-201ENSMUST00000043654 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Renbp-201ENSMUST00000114379 1318 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Pdlim1O70400 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms