Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Gm26750-201ENSMUST00000181718 711 ntTSL 5 BASIC13.01□□□□□ -0.33
Dkk1O54908 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Plet1os-202ENSMUST00000190941 1119 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Gm37910-201ENSMUST00000194770 217 ntTSL 5 BASIC13.01□□□□□ -0.33
Dkk1O54908 Gm37134-201ENSMUST00000195810 628 ntTSL 3 BASIC13.01□□□□□ -0.33
Dkk1O54908 Lmo4-207ENSMUST00000196264 1263 ntTSL 5 BASIC13.01□□□□□ -0.33
Dkk1O54908 Gm7587-201ENSMUST00000207618 1021 ntBASIC13.01□□□□□ -0.33
Dkk1O54908 Pts-206ENSMUST00000214873 511 ntTSL 5 BASIC13.01□□□□□ -0.33
Dkk1O54908 AC154765.1-201ENSMUST00000217732 439 ntTSL 3 BASIC13.01□□□□□ -0.33
Dkk1O54908 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Olfr780-201ENSMUST00000063168 1025 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Dkk1O54908 Olfr121-201ENSMUST00000074555 1253 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Klk1b22-201ENSMUST00000077528 855 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Gm18881-201ENSMUST00000220450 1545 ntBASIC13.01□□□□□ -0.33
Dkk1O54908 Slc22a18-202ENSMUST00000105917 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC13.01□□□□□ -0.33
Dkk1O54908 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Esco1-203ENSMUST00000115864 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Tom1l2-205ENSMUST00000102682 2256 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Dkk1O54908 Men1-206ENSMUST00000113502 2652 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Capn15-205ENSMUST00000212520 5216 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC13□□□□□ -0.33
Dkk1O54908 Hacd3-201ENSMUST00000036615 2709 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Dkk1O54908 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
Dkk1O54908 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Gm26734-201ENSMUST00000181769 1594 ntTSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Gm8242-201ENSMUST00000193029 1420 ntBASIC13□□□□□ -0.33
Dkk1O54908 Olfr1420-201ENSMUST00000072784 1444 ntAPPRIS P1 BASIC13□□□□□ -0.33
Dkk1O54908 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 AC153524.2-201ENSMUST00000218351 1375 ntTSL 5 BASIC13□□□□□ -0.33
Dkk1O54908 AC131586.3-201ENSMUST00000228355 1367 ntBASIC13□□□□□ -0.33
Dkk1O54908 Cpt2-203ENSMUST00000106720 1015 ntTSL 2 BASIC13□□□□□ -0.33
Dkk1O54908 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC13□□□□□ -0.33
Dkk1O54908 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
Dkk1O54908 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Dkk1O54908 Olfr1078-ps1-201ENSMUST00000117978 632 ntBASIC13□□□□□ -0.33
Dkk1O54908 Olfr1069-ps1-201ENSMUST00000120755 965 ntBASIC13□□□□□ -0.33
Dkk1O54908 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13□□□□□ -0.33
Dkk1O54908 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Dkk1O54908 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC13□□□□□ -0.33
Dkk1O54908 Gm29353-201ENSMUST00000185801 620 ntTSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC13□□□□□ -0.33
Dkk1O54908 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Gm37676-201ENSMUST00000195496 507 ntBASIC13□□□□□ -0.33
Dkk1O54908 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC13□□□□□ -0.33
Dkk1O54908 Gm7631-201ENSMUST00000196935 1100 ntBASIC13□□□□□ -0.33
Dkk1O54908 Arhgdib-201ENSMUST00000032344 1193 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Mdk-202ENSMUST00000069423 773 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Vmn1r232-201ENSMUST00000077001 1159 ntAPPRIS P1 BASIC13□□□□□ -0.33
Dkk1O54908 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC13□□□□□ -0.33
Dkk1O54908 Gm26437-201ENSMUST00000082595 105 ntBASIC13□□□□□ -0.33
Dkk1O54908 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Ralgapa1-201ENSMUST00000085385 7901 ntAPPRIS P2 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC13□□□□□ -0.33
Dkk1O54908 Dgkz-202ENSMUST00000099709 3512 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
Dkk1O54908 Pcbp3-201ENSMUST00000001148 2013 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Gm29361-201ENSMUST00000183323 2000 ntBASIC13□□□□□ -0.33
Dkk1O54908 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
Dkk1O54908 Safb-207ENSMUST00000182533 3122 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
Dkk1O54908 Fam160b1-201ENSMUST00000036407 5630 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dkk1O54908 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Dkk1O54908 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dkk1O54908 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC12.99□□□□□ -0.33
Dkk1O54908 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Dkk1O54908 Six3os1-212ENSMUST00000177220 5601 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Dkk1O54908 9130019P16Rik-202ENSMUST00000145111 4486 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Dkk1O54908 1700023G09Rik-201ENSMUST00000194513 1460 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Dkk1O54908 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dkk1O54908 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dkk1O54908 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
Dkk1O54908 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC12.99□□□□□ -0.33
Dkk1O54908 Zfp385a-201ENSMUST00000168828 2291 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dkk1O54908 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dkk1O54908 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Dkk1O54908 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 28 ms