Protein–RNA interactions for Protein: O35188

Cx3cl1, Fractalkine, mousemouse

Predictions only

Length 395 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cx3cl1O35188 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Camk2d-203ENSMUST00000106399 4169 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Dpm3-202ENSMUST00000107462 827 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Gm24158-201ENSMUST00000175263 71 ntBASIC13.55□□□□□ -0.24
Cx3cl1O35188 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 1600017P15Rik-201ENSMUST00000083427 412 ntBASIC13.55□□□□□ -0.24
Cx3cl1O35188 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Stag1-206ENSMUST00000129269 6186 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Sec11a-201ENSMUST00000026818 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Nab1-205ENSMUST00000186764 3640 ntAPPRIS ALT1 TSL 5 BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Dab1-203ENSMUST00000106830 5278 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Itgb1-201ENSMUST00000090006 3815 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Cx3cl1O35188 Zbtb14-201ENSMUST00000062369 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Adam15-204ENSMUST00000107448 2893 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Polr2i-202ENSMUST00000108192 508 ntTSL 2 BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Tmsb10-203ENSMUST00000114050 570 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Tex30-213ENSMUST00000156392 1122 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cx3cl1O35188 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Ighv8-7-201ENSMUST00000194349 297 ntBASIC13.54□□□□□ -0.24
Cx3cl1O35188 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC13.54□□□□□ -0.24
Cx3cl1O35188 AC158529.1-201ENSMUST00000223618 239 ntBASIC13.54□□□□□ -0.24
Cx3cl1O35188 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Cd151-202ENSMUST00000106000 1865 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Pld5-202ENSMUST00000111166 1370 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Gata1-201ENSMUST00000033502 1902 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Fam151a-201ENSMUST00000047620 1923 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Rab3a-204ENSMUST00000110093 1442 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cx3cl1O35188 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Gm6756-201ENSMUST00000180647 1620 ntBASIC13.53□□□□□ -0.24
Cx3cl1O35188 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Gm45779-201ENSMUST00000212189 4064 ntBASIC13.53□□□□□ -0.24
Cx3cl1O35188 Slc44a3-201ENSMUST00000039197 2620 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Lsm12-202ENSMUST00000107156 2015 ntTSL 5 BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Mir449b-201ENSMUST00000104833 80 ntBASIC13.53□□□□□ -0.24
Cx3cl1O35188 Gm15706-201ENSMUST00000139612 899 ntTSL 2 BASIC13.53□□□□□ -0.24
Cx3cl1O35188 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cx3cl1O35188 Gm9824-201ENSMUST00000178707 561 ntBASIC13.53□□□□□ -0.24
Cx3cl1O35188 Gm10253-201ENSMUST00000194270 940 ntBASIC13.53□□□□□ -0.24
Cx3cl1O35188 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms