Protein–RNA interactions for Protein: O35185

Bhlhe40, Class E basic helix-loop-helix protein 40, mousemouse

Predictions only

Length 411 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Bhlhe40O35185 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Gm45751-201ENSMUST00000210185 1573 ntBASIC14.16□□□□□ -0.14
Bhlhe40O35185 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Tnfrsf11a-201ENSMUST00000027559 5027 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Bhlhe40O35185 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.16□□□□□ -0.14
Bhlhe40O35185 Gm13034-201ENSMUST00000121342 3177 ntBASIC14.16□□□□□ -0.14
Bhlhe40O35185 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Gm3365-201ENSMUST00000216296 1480 ntBASIC14.15□□□□□ -0.14
Bhlhe40O35185 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Arfrp1-202ENSMUST00000108808 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Gm7488-201ENSMUST00000117148 684 ntBASIC14.15□□□□□ -0.14
Bhlhe40O35185 4930527A07Rik-201ENSMUST00000130677 559 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Pfdn6-204ENSMUST00000174048 560 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
Bhlhe40O35185 H2-Pa-201ENSMUST00000182803 626 ntBASIC14.15□□□□□ -0.14
Bhlhe40O35185 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC14.15□□□□□ -0.14
Bhlhe40O35185 AC123645.1-201ENSMUST00000228469 605 ntBASIC14.15□□□□□ -0.14
Bhlhe40O35185 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Ptpn6-203ENSMUST00000171549 2226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Sema6c-213ENSMUST00000168321 3553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
Bhlhe40O35185 BC001981-202ENSMUST00000191393 1545 ntBASIC14.15□□□□□ -0.14
Bhlhe40O35185 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Bhlhe40O35185 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Bhlhe40O35185 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Gm3436-201ENSMUST00000179930 840 ntBASIC14.14□□□□□ -0.15
Bhlhe40O35185 Gm24694-201ENSMUST00000180054 110 ntBASIC14.14□□□□□ -0.15
Bhlhe40O35185 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Gm27663-201ENSMUST00000184839 110 ntBASIC14.14□□□□□ -0.15
Bhlhe40O35185 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Gm6218-201ENSMUST00000219812 628 ntBASIC14.14□□□□□ -0.15
Bhlhe40O35185 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Phospho2-202ENSMUST00000112266 2194 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Pik3ap1-201ENSMUST00000059672 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Edem3-201ENSMUST00000059498 6327 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Arhgef1-201ENSMUST00000047873 3212 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Bhlhe40O35185 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Mettl7a3-201ENSMUST00000075420 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Ilkap-208ENSMUST00000187306 377 ntTSL 5 BASIC14.13□□□□□ -0.15
Bhlhe40O35185 AA619741-201ENSMUST00000195095 646 ntBASIC14.13□□□□□ -0.15
Bhlhe40O35185 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.13□□□□□ -0.15
Bhlhe40O35185 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Gm9229-201ENSMUST00000222777 126 ntBASIC14.13□□□□□ -0.15
Bhlhe40O35185 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.13□□□□□ -0.15
Bhlhe40O35185 Uts2-201ENSMUST00000030803 538 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Ufsp1-201ENSMUST00000052825 1037 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Rnf151-201ENSMUST00000008626 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Bhlhe40O35185 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 30.3 ms