Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Gm6198-201ENSMUST00000191337 2929 ntBASIC17.11■□□□□ 0.33
Hdac1O09106 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hdac1O09106 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
Hdac1O09106 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 Rhno1-202ENSMUST00000112151 1108 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 Gm9385-201ENSMUST00000117563 472 ntBASIC17.11■□□□□ 0.33
Hdac1O09106 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC17.11■□□□□ 0.33
Hdac1O09106 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Hdac1O09106 Mir8098-201ENSMUST00000184011 137 ntBASIC17.11■□□□□ 0.33
Hdac1O09106 2010010A06Rik-202ENSMUST00000186356 694 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 Idh2-207ENSMUST00000206714 392 ntTSL 3 BASIC17.11■□□□□ 0.33
Hdac1O09106 AC123645.1-201ENSMUST00000228469 605 ntBASIC17.11■□□□□ 0.33
Hdac1O09106 Ndufv3-202ENSMUST00000064798 485 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC17.11■□□□□ 0.33
Hdac1O09106 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Hdac1O09106 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 AC115735.4-201ENSMUST00000227460 1944 ntBASIC17.11■□□□□ 0.33
Hdac1O09106 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Hdac1O09106 Mms22l-201ENSMUST00000050446 4261 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 Opa1-201ENSMUST00000038867 3230 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Hdac1O09106 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
Hdac1O09106 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hdac1O09106 Tpd52-203ENSMUST00000091355 3081 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Tnxb-202ENSMUST00000168533 9381 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Hdac1O09106 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC17.1■□□□□ 0.33
Hdac1O09106 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Vav1-203ENSMUST00000112870 2743 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 AC126549.2-201ENSMUST00000223997 1976 ntBASIC17.1■□□□□ 0.33
Hdac1O09106 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Hdac1O09106 Proser2-202ENSMUST00000114942 4398 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
Hdac1O09106 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Gm13884-201ENSMUST00000118103 829 ntBASIC17.1■□□□□ 0.33
Hdac1O09106 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC17.1■□□□□ 0.33
Hdac1O09106 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC17.1■□□□□ 0.33
Hdac1O09106 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Dnm1-201ENSMUST00000078352 3246 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Ilvbl-203ENSMUST00000218215 2331 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Chit1-201ENSMUST00000086475 1688 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Hdac1O09106 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC17.1■□□□□ 0.33
Hdac1O09106 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac1O09106 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC17.09■□□□□ 0.33
Hdac1O09106 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac1O09106 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac1O09106 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac1O09106 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac1O09106 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hdac1O09106 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC17.09■□□□□ 0.33
Hdac1O09106 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC17.09■□□□□ 0.33
Hdac1O09106 Gm15483-201ENSMUST00000120338 456 ntBASIC17.09■□□□□ 0.33
Hdac1O09106 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac1O09106 Gm5864-201ENSMUST00000202263 970 ntBASIC17.09■□□□□ 0.33
Hdac1O09106 Gm43332-201ENSMUST00000202511 1044 ntBASIC17.09■□□□□ 0.33
Hdac1O09106 Gm10459-201ENSMUST00000202708 1155 ntBASIC17.09■□□□□ 0.33
Hdac1O09106 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac1O09106 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac1O09106 Dgcr6-202ENSMUST00000076757 894 ntTSL 5 BASIC17.09■□□□□ 0.33
Hdac1O09106 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac1O09106 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac1O09106 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac1O09106 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac1O09106 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac1O09106 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
Hdac1O09106 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Hdac1O09106 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 50.3 ms