Protein–RNA interactions for Protein: O08848

Trove2, 60 kDa SS-A/Ro ribonucleoprotein, mousemouse

Predictions only

Length 538 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trove2O08848 Trim2-203ENSMUST00000107691 7428 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trove2O08848 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trove2O08848 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trove2O08848 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trove2O08848 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC14.8□□□□□ -0.04
Trove2O08848 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Trove2O08848 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trove2O08848 Cttnbp2nl-202ENSMUST00000098763 4834 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trove2O08848 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.8□□□□□ -0.04
Trove2O08848 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trove2O08848 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trove2O08848 Edem3-203ENSMUST00000188145 3262 ntTSL 5 BASIC14.8□□□□□ -0.04
Trove2O08848 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trove2O08848 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trove2O08848 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trove2O08848 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trove2O08848 Gm11453-201ENSMUST00000117318 1007 ntBASIC14.8□□□□□ -0.04
Trove2O08848 Gm7862-201ENSMUST00000121461 292 ntBASIC14.8□□□□□ -0.04
Trove2O08848 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC14.8□□□□□ -0.04
Trove2O08848 Gm37153-201ENSMUST00000193637 231 ntBASIC14.8□□□□□ -0.04
Trove2O08848 Gm5864-201ENSMUST00000202263 970 ntBASIC14.8□□□□□ -0.04
Trove2O08848 AC151836.1-202ENSMUST00000226259 753 ntBASIC14.8□□□□□ -0.04
Trove2O08848 Mxra8os-201ENSMUST00000097740 687 ntBASIC14.8□□□□□ -0.04
Trove2O08848 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trove2O08848 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.8□□□□□ -0.04
Trove2O08848 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trove2O08848 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trove2O08848 Bach2-201ENSMUST00000037416 3462 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trove2O08848 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trove2O08848 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trove2O08848 Ppp2r5c-201ENSMUST00000084985 1847 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trove2O08848 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trove2O08848 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trove2O08848 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trove2O08848 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trove2O08848 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Chml-201ENSMUST00000104984 6905 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trove2O08848 Chml-202ENSMUST00000209720 6905 ntTSL 5 BASIC14.79□□□□□ -0.04
Trove2O08848 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Ube2j2-203ENSMUST00000105581 1391 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trove2O08848 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trove2O08848 Catsper4-204ENSMUST00000169381 1506 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trove2O08848 P2rx6-203ENSMUST00000171002 1353 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Gm18489-201ENSMUST00000172565 551 ntBASIC14.79□□□□□ -0.04
Trove2O08848 Aldh1a3-203ENSMUST00000174209 1496 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC14.79□□□□□ -0.04
Trove2O08848 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.79□□□□□ -0.04
Trove2O08848 Alpl-201ENSMUST00000030551 2522 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trove2O08848 Pkdrej-201ENSMUST00000064370 7058 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Trove2O08848 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Trove2O08848 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.79□□□□□ -0.04
Trove2O08848 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trove2O08848 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trove2O08848 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Trove2O08848 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trove2O08848 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trove2O08848 Gm42769-201ENSMUST00000198576 1659 ntBASIC14.78□□□□□ -0.04
Trove2O08848 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trove2O08848 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trove2O08848 Dlk2-203ENSMUST00000166617 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trove2O08848 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.78□□□□□ -0.04
Trove2O08848 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trove2O08848 Pitpnm2-205ENSMUST00000161273 6792 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trove2O08848 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trove2O08848 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trove2O08848 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trove2O08848 H2-Bl-201ENSMUST00000173080 1138 ntAPPRIS P5 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trove2O08848 H2-Bl-204ENSMUST00000184502 862 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trove2O08848 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trove2O08848 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC14.78□□□□□ -0.04
Trove2O08848 AC161829.1-201ENSMUST00000220298 281 ntBASIC14.78□□□□□ -0.04
Trove2O08848 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trove2O08848 CT009510.1-201ENSMUST00000227972 270 ntBASIC14.78□□□□□ -0.04
Trove2O08848 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trove2O08848 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trove2O08848 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trove2O08848 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trove2O08848 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trove2O08848 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.78□□□□□ -0.04
Trove2O08848 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 29 ms