Protein–RNA interactions for Protein: O08784

Tcof1, Treacle protein, mousemouse

Known RBP Predictions only

Length 1,320 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tcof1O08784 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tcof1O08784 Pdk2-201ENSMUST00000038431 2246 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
Tcof1O08784 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Tcof1O08784 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tcof1O08784 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tcof1O08784 Gm26681-201ENSMUST00000180851 1440 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tcof1O08784 Hr-201ENSMUST00000022691 5487 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tcof1O08784 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tcof1O08784 Hist1h4d-201ENSMUST00000102968 1138 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Tcof1O08784 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC16.84■□□□□ 0.29
Tcof1O08784 Gm27437-201ENSMUST00000183429 107 ntBASIC16.84■□□□□ 0.29
Tcof1O08784 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC16.84■□□□□ 0.29
Tcof1O08784 AI463170-203ENSMUST00000219353 430 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
Tcof1O08784 Chst11-201ENSMUST00000040110 5527 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tcof1O08784 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tcof1O08784 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Tcof1O08784 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tcof1O08784 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
Tcof1O08784 Cyp20a1-201ENSMUST00000060608 2223 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tcof1O08784 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Tcof1O08784 Nupl1-207ENSMUST00000225311 2475 ntBASIC16.83■□□□□ 0.29
Tcof1O08784 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Tcof1O08784 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tcof1O08784 Gm4081-201ENSMUST00000195287 1838 ntBASIC16.83■□□□□ 0.29
Tcof1O08784 Fzd6-202ENSMUST00000179165 4325 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tcof1O08784 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
Tcof1O08784 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC16.83■□□□□ 0.29
Tcof1O08784 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.29
Tcof1O08784 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tcof1O08784 Megf11-210ENSMUST00000164113 6018 ntTSL 5 BASIC16.83■□□□□ 0.29
Tcof1O08784 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Tcof1O08784 Nfat5-211ENSMUST00000151114 4982 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Mafg-203ENSMUST00000106181 840 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
Tcof1O08784 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Vamp2-202ENSMUST00000117780 1113 ntTSL 2 BASIC16.83■□□□□ 0.28
Tcof1O08784 Mir1897-201ENSMUST00000122581 272 ntBASIC16.83■□□□□ 0.28
Tcof1O08784 Mpv17-203ENSMUST00000200833 1171 ntTSL 5 BASIC16.83■□□□□ 0.28
Tcof1O08784 5430431A17Rik-201ENSMUST00000206342 795 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Sar1b-201ENSMUST00000020653 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 AC125206.2-201ENSMUST00000217454 574 ntBASIC16.83■□□□□ 0.28
Tcof1O08784 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC16.83■□□□□ 0.28
Tcof1O08784 Gm9063-201ENSMUST00000223299 582 ntBASIC16.83■□□□□ 0.28
Tcof1O08784 Arhgef33-209ENSMUST00000225223 714 ntBASIC16.83■□□□□ 0.28
Tcof1O08784 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Cmtm5-201ENSMUST00000037814 1095 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 S100a7a-201ENSMUST00000079286 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Rnf180-203ENSMUST00000224662 2734 ntAPPRIS ALT2 BASIC16.83■□□□□ 0.28
Tcof1O08784 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Otud6b-201ENSMUST00000117268 3266 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Fam76b-201ENSMUST00000059579 3702 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Prkcd-207ENSMUST00000112210 2777 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Map3k14-201ENSMUST00000021324 4246 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Tcof1O08784 Arpc4-203ENSMUST00000203578 1323 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC16.82■□□□□ 0.28
Tcof1O08784 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Pds5b-208ENSMUST00000202170 6598 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tcof1O08784 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Gm2061-201ENSMUST00000180623 2761 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Tcof1O08784 Ror1-201ENSMUST00000039630 5762 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Rsu1-202ENSMUST00000114791 1604 ntTSL 5 BASIC16.82■□□□□ 0.28
Tcof1O08784 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Tcof1O08784 Ppcs-202ENSMUST00000106316 954 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC16.82■□□□□ 0.28
Tcof1O08784 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tcof1O08784 Gstt1-201ENSMUST00000001713 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Gm44344-201ENSMUST00000200287 129 ntBASIC16.82■□□□□ 0.28
Tcof1O08784 Gm7775-201ENSMUST00000218871 853 ntBASIC16.82■□□□□ 0.28
Tcof1O08784 Myl3-201ENSMUST00000079784 937 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Ly6h-207ENSMUST00000163116 2801 ntAPPRIS ALT1 TSL 2 BASIC16.82■□□□□ 0.28
Tcof1O08784 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC16.82■□□□□ 0.28
Tcof1O08784 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
Tcof1O08784 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 1810014B01Rik-201ENSMUST00000181587 1661 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Arid4b-204ENSMUST00000110536 5783 ntTSL 5 BASIC16.82■□□□□ 0.28
Tcof1O08784 Syde2-204ENSMUST00000212479 3810 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Tcof1O08784 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Chodl-201ENSMUST00000023568 2535 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Slc20a2-201ENSMUST00000067786 3566 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Tcof1O08784 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 46 ms