Protein–RNA interactions for Protein: G3X8Y1

Trim55, MCG19772, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim55G3X8Y1 Ctdspl2-201ENSMUST00000036647 5053 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Bpnt1-202ENSMUST00000110965 1046 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Bola2-203ENSMUST00000130498 1266 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 4930526A20Rik-201ENSMUST00000134228 941 ntBASIC14.81□□□□□ -0.04
Trim55G3X8Y1 4833413E03Rik-201ENSMUST00000013706 1091 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 1810012K08Rik-201ENSMUST00000155199 574 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Dusp13-213ENSMUST00000184703 902 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Gm21362-201ENSMUST00000194272 928 ntBASIC14.81□□□□□ -0.04
Trim55G3X8Y1 A430033K04Rik-204ENSMUST00000200521 1110 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Gm40977-203ENSMUST00000222324 886 ntTSL 2 BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 A430033K04Rik-201ENSMUST00000032590 1109 ntTSL 5 BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Pcdh8-201ENSMUST00000039568 4000 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Hnrnpul1-201ENSMUST00000043765 3354 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Tbx3-203ENSMUST00000121021 4777 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Rps6kb1-207ENSMUST00000154617 5531 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Trim55G3X8Y1 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Gm9951-202ENSMUST00000149618 1772 ntTSL 2 BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Gm45743-201ENSMUST00000212701 2795 ntBASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Prrc2b-201ENSMUST00000036691 8612 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Fbxo27-201ENSMUST00000039998 1946 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Adamts5-201ENSMUST00000023611 8091 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Nxt1-202ENSMUST00000109961 1116 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Cnn1-203ENSMUST00000214601 1225 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Bcl2l12-201ENSMUST00000003290 1075 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Nxt1-201ENSMUST00000047177 956 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Olfr71-202ENSMUST00000107862 2587 ntAPPRIS P1 TSL 3 BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Rbm42-202ENSMUST00000108141 1526 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Gm20149-201ENSMUST00000214691 1667 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Agpat5-202ENSMUST00000149565 10779 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Mark2-215ENSMUST00000168872 2124 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Osbpl10-204ENSMUST00000182384 2158 ntTSL 5 BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 5031415H12Rik-201ENSMUST00000181546 2481 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Ncoa7-201ENSMUST00000068567 5105 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
Trim55G3X8Y1 Tgm1-203ENSMUST00000178034 2730 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim55G3X8Y1 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim55G3X8Y1 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Trim55G3X8Y1 Ehd1-201ENSMUST00000025684 3353 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim55G3X8Y1 0610010K14Rik-207ENSMUST00000108577 659 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim55G3X8Y1 Bdnf-205ENSMUST00000111045 3973 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim55G3X8Y1 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim55G3X8Y1 Gm5639-201ENSMUST00000122305 2403 ntBASIC14.79□□□□□ -0.04
Trim55G3X8Y1 Snrnp48-202ENSMUST00000178564 847 ntTSL 5 BASIC14.79□□□□□ -0.04
Trim55G3X8Y1 1700025A08Rik-201ENSMUST00000200753 609 ntBASIC14.79□□□□□ -0.04
Trim55G3X8Y1 Gm45058-201ENSMUST00000205810 766 ntBASIC14.79□□□□□ -0.04
Trim55G3X8Y1 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim55G3X8Y1 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim55G3X8Y1 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim55G3X8Y1 Emc3-201ENSMUST00000032425 1985 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim55G3X8Y1 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Trim55G3X8Y1 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
Trim55G3X8Y1 Zbtb20-201ENSMUST00000079441 3086 ntAPPRIS P3 TSL 5 BASIC14.79□□□□□ -0.04
Trim55G3X8Y1 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Fgf13-203ENSMUST00000119833 2237 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Ddx49-201ENSMUST00000008004 2137 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Ptpn6-210ENSMUST00000174265 1743 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Ppp1r11-201ENSMUST00000040402 1599 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Mdm2-202ENSMUST00000105263 3145 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Gm27196-201ENSMUST00000184787 2582 ntBASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Eif1b-201ENSMUST00000007139 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 4931440F15Rik-201ENSMUST00000104962 3274 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Stox2-209ENSMUST00000211882 9696 ntTSL 5 BASIC14.78□□□□□ -0.04
Trim55G3X8Y1 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms