Protein–RNA interactions for Protein: F6WEU2

Ccdc188, Coiled-coil domain-containing 188, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc188F6WEU2 Rabggta-201ENSMUST00000062861 2338 ntTSL 1 (best) BASIC14.4□□□□□ -0.11
Ccdc188F6WEU2 Rnf146-202ENSMUST00000160144 4323 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.11
Ccdc188F6WEU2 Met-203ENSMUST00000115443 6809 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 Agbl3-202ENSMUST00000115012 790 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 Agbl3-203ENSMUST00000115014 805 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 Gm10275-202ENSMUST00000168697 495 ntBASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 Lsm10-203ENSMUST00000179323 808 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 Gm38223-201ENSMUST00000194484 695 ntBASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 Gm42817-201ENSMUST00000198962 607 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 Plin1-203ENSMUST00000205413 1294 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 C230062I16Rik-204ENSMUST00000208342 643 ntTSL 3 BASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 AC122371.3-201ENSMUST00000223402 1061 ntBASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 Gm10275-201ENSMUST00000092620 635 ntBASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 Gm10313-201ENSMUST00000095320 1002 ntBASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 Vps37a-201ENSMUST00000098817 6379 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 Rmnd1-201ENSMUST00000042251 3139 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Ccdc188F6WEU2 Rcbtb2-226ENSMUST00000171767 2692 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Mettl22-201ENSMUST00000046470 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Gm3756-201ENSMUST00000169182 1355 ntBASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Prss12-201ENSMUST00000029603 2602 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Pskh1-201ENSMUST00000049699 3255 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Tvp23b-201ENSMUST00000014321 1784 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Abcb10-201ENSMUST00000075578 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Prr15l-203ENSMUST00000107633 930 ntAPPRIS P1 TSL 2 BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Stpg3-202ENSMUST00000114363 1234 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Gm13369-201ENSMUST00000119442 987 ntBASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Gm12715-201ENSMUST00000121430 1128 ntBASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Isg20-204ENSMUST00000121645 1087 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Gm14017-201ENSMUST00000121934 386 ntBASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Mpc1-202ENSMUST00000124023 555 ntTSL 2 BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 H2-M10.2-201ENSMUST00000023845 1113 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Mirlet7c-2-201ENSMUST00000083674 95 ntBASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Gpc5-202ENSMUST00000175665 2187 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 8030474K03Rik-202ENSMUST00000151231 1940 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Rad18-202ENSMUST00000077088 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Tmtc4-209ENSMUST00000148661 2719 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Cyp2ab1-201ENSMUST00000023513 2720 ntTSL 5 BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Il6st-206ENSMUST00000183886 3004 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Lrriq3-201ENSMUST00000029833 2652 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Lrp6-201ENSMUST00000032322 9368 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Ccdc188F6WEU2 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Elmo2-203ENSMUST00000094329 3466 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Jph4-202ENSMUST00000124493 3200 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Tmem50a-202ENSMUST00000105863 719 ntAPPRIS P1 TSL 3 BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Gm27438-201ENSMUST00000183480 110 ntBASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Gm37489-201ENSMUST00000191883 159 ntBASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Pcbd1-201ENSMUST00000020298 789 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Tyms-ps-201ENSMUST00000219550 915 ntBASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Gemin2-201ENSMUST00000021379 1588 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Gm44832-201ENSMUST00000208849 2303 ntBASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Mcidas-201ENSMUST00000092089 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Mycn-201ENSMUST00000043396 2674 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
Ccdc188F6WEU2 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC14.36□□□□□ -0.11
Ccdc188F6WEU2 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc188F6WEU2 Fam118b-202ENSMUST00000063782 1662 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc188F6WEU2 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc188F6WEU2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc188F6WEU2 Eps8-201ENSMUST00000058210 4567 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc188F6WEU2 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc188F6WEU2 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc188F6WEU2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc188F6WEU2 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC14.36□□□□□ -0.11
Ccdc188F6WEU2 Gm11439-201ENSMUST00000118598 409 ntBASIC14.36□□□□□ -0.11
Ccdc188F6WEU2 Gm15829-201ENSMUST00000145415 869 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Ccdc188F6WEU2 Mocs2-203ENSMUST00000164737 745 ntTSL 3 BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms