Protein–RNA interactions for Protein: E9Q735

Ube4a, Ubiquitin conjugation factor E4 A, mousemouse

Predictions only

Length 1,028 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4aE9Q735 Gm15240-201ENSMUST00000118156 720 ntBASIC17.22■□□□□ 0.35
Ube4aE9Q735 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC17.22■□□□□ 0.35
Ube4aE9Q735 Gm7558-201ENSMUST00000193221 1165 ntBASIC17.22■□□□□ 0.35
Ube4aE9Q735 Gm43438-201ENSMUST00000198133 379 ntBASIC17.22■□□□□ 0.35
Ube4aE9Q735 Tm2d3-207ENSMUST00000206517 905 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ube4aE9Q735 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube4aE9Q735 AC154527.2-201ENSMUST00000225256 1466 ntBASIC17.22■□□□□ 0.35
Ube4aE9Q735 Atp2b3-203ENSMUST00000114479 4637 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Ube4aE9Q735 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Ube4aE9Q735 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC17.22■□□□□ 0.35
Ube4aE9Q735 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Mn1-201ENSMUST00000094463 6860 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Map6d1-201ENSMUST00000040880 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC17.21■□□□□ 0.35
Ube4aE9Q735 AC162801.1-201ENSMUST00000220612 198 ntBASIC17.21■□□□□ 0.35
Ube4aE9Q735 AC099934.3-201ENSMUST00000223192 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4aE9Q735 AC159006.1-201ENSMUST00000226396 258 ntBASIC17.21■□□□□ 0.35
Ube4aE9Q735 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Ogfrl1-201ENSMUST00000027343 4844 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Cttn-202ENSMUST00000103079 3286 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Atp6v1h-204ENSMUST00000192698 1811 ntTSL 5 BASIC17.21■□□□□ 0.35
Ube4aE9Q735 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC17.21■□□□□ 0.35
Ube4aE9Q735 Casp8-201ENSMUST00000027189 2585 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
Ube4aE9Q735 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Ube4aE9Q735 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4aE9Q735 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4aE9Q735 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4aE9Q735 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC17.2■□□□□ 0.34
Ube4aE9Q735 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4aE9Q735 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Ube4aE9Q735 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4aE9Q735 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Ube4aE9Q735 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4aE9Q735 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC17.2■□□□□ 0.34
Ube4aE9Q735 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4aE9Q735 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4aE9Q735 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Ube4aE9Q735 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4aE9Q735 Ube2i-211ENSMUST00000173713 890 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4aE9Q735 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC17.2■□□□□ 0.34
Ube4aE9Q735 Gm27701-201ENSMUST00000184498 110 ntBASIC17.2■□□□□ 0.34
Ube4aE9Q735 Mir7654-201ENSMUST00000185082 70 ntBASIC17.2■□□□□ 0.34
Ube4aE9Q735 Gm37667-201ENSMUST00000193103 752 ntTSL 5 BASIC17.2■□□□□ 0.34
Ube4aE9Q735 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC17.2■□□□□ 0.34
Ube4aE9Q735 Gm37748-201ENSMUST00000194379 1140 ntBASIC17.2■□□□□ 0.34
Ube4aE9Q735 Gm18027-201ENSMUST00000218947 619 ntBASIC17.2■□□□□ 0.34
Ube4aE9Q735 Gbp5-201ENSMUST00000090127 3055 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4aE9Q735 Map3k8-201ENSMUST00000025078 2507 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4aE9Q735 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Ube4aE9Q735 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Arvcf-205ENSMUST00000115614 4698 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Bhlhb9-201ENSMUST00000068755 2823 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Gm15678-201ENSMUST00000117573 960 ntBASIC17.19■□□□□ 0.34
Ube4aE9Q735 Gm15806-201ENSMUST00000120696 955 ntBASIC17.19■□□□□ 0.34
Ube4aE9Q735 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Cacna1h-205ENSMUST00000159610 8230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Mfsd6l-201ENSMUST00000053211 2060 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Ube4aE9Q735 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4aE9Q735 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4aE9Q735 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC17.18■□□□□ 0.34
Ube4aE9Q735 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC17.18■□□□□ 0.34
Ube4aE9Q735 Agrn-206ENSMUST00000180572 6891 ntAPPRIS P1 TSL 5 BASIC17.18■□□□□ 0.34
Ube4aE9Q735 Sbds-201ENSMUST00000026387 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4aE9Q735 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4aE9Q735 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC17.18■□□□□ 0.34
Ube4aE9Q735 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Ube4aE9Q735 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC17.18■□□□□ 0.34
Ube4aE9Q735 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms