Protein–RNA interactions for Protein: E9PXC0

Srp54b, Signal recognition particle 54 kDa protein, mousemouse

Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54bE9PXC0 Hist1h3f-201ENSMUST00000075558 1261 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Trnt1-204ENSMUST00000113249 1614 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
Srp54bE9PXC0 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Ecsit-201ENSMUST00000098937 1673 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Ube2d3-208ENSMUST00000197134 2493 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 AI413582-204ENSMUST00000154473 836 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Gm35549-203ENSMUST00000204619 644 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Gm7390-201ENSMUST00000212452 1216 ntBASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Mobp-207ENSMUST00000215512 498 ntTSL 2 BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.17□□□□□ -0.14
Srp54bE9PXC0 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Emd-203ENSMUST00000096424 896 ntTSL 5 BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Srp54bE9PXC0 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Nlrx1-203ENSMUST00000169651 3621 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Hist1h2ae-201ENSMUST00000102969 704 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Cmss1-201ENSMUST00000114371 930 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Gm12859-201ENSMUST00000117834 427 ntBASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Gm10275-202ENSMUST00000168697 495 ntBASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Gm45552-201ENSMUST00000209340 778 ntTSL 3 BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 AC151971.1-201ENSMUST00000217329 993 ntTSL 5 BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Hist1h2ah-201ENSMUST00000091742 405 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Gm10275-201ENSMUST00000092620 635 ntBASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Gatad2a-203ENSMUST00000177851 5007 ntAPPRIS ALT2 TSL 5 BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Gata4-202ENSMUST00000118022 3374 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Srp54bE9PXC0 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Brd2-203ENSMUST00000114242 4483 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 BC001981-202ENSMUST00000191393 1545 ntBASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Gm29154-231ENSMUST00000215120 1367 ntTSL 5 BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Rdm1-201ENSMUST00000010506 1124 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Gm6473-201ENSMUST00000188572 1210 ntBASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Srp54bE9PXC0 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 40.2 ms