Protein–RNA interactions for Protein: B2RT89

Slc22a28, Predicted gene, EG434674, mousemouse

Predictions only

Length 552 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc22a28B2RT89 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc22a28B2RT89 Otop3-202ENSMUST00000106543 2369 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc22a28B2RT89 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Slc22a28B2RT89 Fdps-203ENSMUST00000196709 1382 ntAPPRIS P1 TSL 5 BASIC13.3□□□□□ -0.28
Slc22a28B2RT89 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Slc22a28B2RT89 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc22a28B2RT89 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc22a28B2RT89 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC13.3□□□□□ -0.28
Slc22a28B2RT89 Pgbd5-201ENSMUST00000052580 2824 ntAPPRIS P2 TSL 5 BASIC13.3□□□□□ -0.28
Slc22a28B2RT89 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc22a28B2RT89 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Slc22a28B2RT89 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Slc22a28B2RT89 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Gm5479-201ENSMUST00000160578 435 ntBASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Gm10275-202ENSMUST00000168697 495 ntBASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Gm5177-201ENSMUST00000183092 997 ntBASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Gm10459-201ENSMUST00000202708 1155 ntBASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Pde4a-202ENSMUST00000039413 4653 ntAPPRIS P3 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Igflr1-201ENSMUST00000043850 1186 ntAPPRIS P2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Ube2f-201ENSMUST00000059743 1154 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Gm10275-201ENSMUST00000092620 635 ntBASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Xrcc1-201ENSMUST00000063249 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Kctd14-206ENSMUST00000206658 2339 ntAPPRIS P3 TSL 3 BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Tgif2-202ENSMUST00000081335 2900 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Slc22a28B2RT89 Mbl1-202ENSMUST00000225792 1563 ntAPPRIS P1 BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Gm16838-201ENSMUST00000144594 816 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Mir5131-201ENSMUST00000175426 93 ntBASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Gm9449-201ENSMUST00000207265 1011 ntBASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Mcf2l-207ENSMUST00000110876 5253 ntAPPRIS P2 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC13.28□□□□□ -0.28
Slc22a28B2RT89 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.28□□□□□ -0.28
Slc22a28B2RT89 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.27□□□□□ -0.28
Slc22a28B2RT89 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc22a28B2RT89 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc22a28B2RT89 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Slc22a28B2RT89 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.28
Slc22a28B2RT89 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc22a28B2RT89 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc22a28B2RT89 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Slc22a28B2RT89 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Slc22a28B2RT89 Ror2-201ENSMUST00000021918 3985 ntAPPRIS P2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc22a28B2RT89 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc22a28B2RT89 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.27□□□□□ -0.28
Slc22a28B2RT89 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc22a28B2RT89 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC13.27□□□□□ -0.28
Slc22a28B2RT89 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.28
Slc22a28B2RT89 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC13.27□□□□□ -0.29
Slc22a28B2RT89 Tnnt1-203ENSMUST00000108587 1059 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Slc22a28B2RT89 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.27□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 64.8 ms