Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn7aB1AYL1 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn7aB1AYL1 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn7aB1AYL1 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC18.22■□□□□ 0.51
Scn7aB1AYL1 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn7aB1AYL1 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.22■□□□□ 0.51
Scn7aB1AYL1 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn7aB1AYL1 Zfp36-202ENSMUST00000209061 2465 ntAPPRIS ALT2 BASIC18.21■□□□□ 0.51
Scn7aB1AYL1 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn7aB1AYL1 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn7aB1AYL1 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC18.21■□□□□ 0.51
Scn7aB1AYL1 Dapk1-207ENSMUST00000226059 5009 ntBASIC18.21■□□□□ 0.51
Scn7aB1AYL1 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn7aB1AYL1 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC18.21■□□□□ 0.51
Scn7aB1AYL1 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn7aB1AYL1 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn7aB1AYL1 Hcn4-201ENSMUST00000034889 6118 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn7aB1AYL1 Gm10156-201ENSMUST00000122364 462 ntBASIC18.21■□□□□ 0.51
Scn7aB1AYL1 Gm18054-201ENSMUST00000207539 555 ntBASIC18.21■□□□□ 0.51
Scn7aB1AYL1 2900005J15Rik-202ENSMUST00000171190 2025 ntBASIC18.21■□□□□ 0.51
Scn7aB1AYL1 Sft2d2-201ENSMUST00000043338 5535 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn7aB1AYL1 Tmem116-204ENSMUST00000111795 2221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
Scn7aB1AYL1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC18.21■□□□□ 0.51
Scn7aB1AYL1 Mageb10-ps-201ENSMUST00000119697 1407 ntBASIC18.21■□□□□ 0.5
Scn7aB1AYL1 Phyh-201ENSMUST00000027975 1438 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
Scn7aB1AYL1 Map4k5-203ENSMUST00000110570 4498 ntAPPRIS P5 TSL 5 BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 Gstt3-201ENSMUST00000001715 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 Gm15317-201ENSMUST00000129569 699 ntTSL 3 BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 Gm3893-201ENSMUST00000178882 909 ntAPPRIS P1 TSL 5 BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 Psmc3ip-201ENSMUST00000019447 1291 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 Gm13730-201ENSMUST00000121036 1462 ntBASIC18.2■□□□□ 0.5
Scn7aB1AYL1 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 Gm13075-202ENSMUST00000149247 1621 ntTSL 5 BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 B4galt5-201ENSMUST00000109221 4210 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 Slc9a6-202ENSMUST00000114784 4449 ntTSL 5 BASIC18.2■□□□□ 0.5
Scn7aB1AYL1 Syngr2-201ENSMUST00000026649 1520 ntAPPRIS P2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Espn-212ENSMUST00000105658 2815 ntAPPRIS ALT2 TSL 5 BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Aars-201ENSMUST00000034441 5750 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Mb-202ENSMUST00000166179 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Mb-203ENSMUST00000169226 1106 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Mir6420-201ENSMUST00000185032 102 ntBASIC18.19■□□□□ 0.5
Scn7aB1AYL1 AC126253.1-201ENSMUST00000227974 824 ntBASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Ceacam10-201ENSMUST00000038069 1048 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Gm8399-201ENSMUST00000082300 1117 ntBASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Ifitm10-202ENSMUST00000084412 1158 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Glmn-202ENSMUST00000082121 1945 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Klhdc10-202ENSMUST00000068259 5901 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Sema6d-202ENSMUST00000076335 6276 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Qk-201ENSMUST00000042296 6718 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Mboat7-201ENSMUST00000038608 2878 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
Scn7aB1AYL1 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Gm42693-201ENSMUST00000196779 631 ntBASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 AC131997.1-201ENSMUST00000228611 1229 ntBASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Cd37-201ENSMUST00000033063 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Fam241b-202ENSMUST00000064050 1096 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Prss2-201ENSMUST00000070380 815 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Gm5161-201ENSMUST00000075243 853 ntBASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Clcf1-201ENSMUST00000046506 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Alkbh4-201ENSMUST00000041100 1773 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Gm15198-201ENSMUST00000117283 177 ntBASIC18.18■□□□□ 0.5
Scn7aB1AYL1 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Gm22331-201ENSMUST00000158066 136 ntBASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Gm9299-201ENSMUST00000206392 1140 ntBASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 B230118H07Rik-202ENSMUST00000099682 895 ntAPPRIS ALT2 TSL 5 BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Ociad1-201ENSMUST00000031038 1523 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Apbb1-212ENSMUST00000189072 2085 ntTSL 5 BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
Scn7aB1AYL1 Pcgf2-201ENSMUST00000018681 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
Retrieved 100 of 76,532 protein–RNA pairs in 71.7 ms