Protein–RNA interactions for Protein: B1AVM1

Gm12887, Predicted gene 12887, mousemouse

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm12887B1AVM1 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Gm32369-201ENSMUST00000222630 1467 ntTSL 5 BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Vps72-201ENSMUST00000009102 1456 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Rabep2-201ENSMUST00000106405 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Aph1a-202ENSMUST00000056710 1601 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Lypla1-208ENSMUST00000150971 877 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Fbxo9-203ENSMUST00000159099 1201 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Mpst-202ENSMUST00000167140 1279 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Rpp40-202ENSMUST00000174230 1053 ntTSL 5 BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Gm6296-201ENSMUST00000222599 943 ntBASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Aff4-201ENSMUST00000060945 10099 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Cacna2d1-202ENSMUST00000078272 7311 ntTSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Gm12887B1AVM1 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.65□□□□□ -0.55
Gm12887B1AVM1 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Gm12887B1AVM1 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Gm12887B1AVM1 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC11.65□□□□□ -0.55
Gm12887B1AVM1 Gm12626-201ENSMUST00000117339 1983 ntBASIC11.65□□□□□ -0.55
Gm12887B1AVM1 Gm12623-201ENSMUST00000119849 1983 ntBASIC11.65□□□□□ -0.55
Gm12887B1AVM1 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC11.65□□□□□ -0.55
Gm12887B1AVM1 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.55
Gm12887B1AVM1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Ppip5k2-202ENSMUST00000112845 6239 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Sap18-201ENSMUST00000111267 660 ntTSL 2 BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Wdr74-202ENSMUST00000210512 1078 ntTSL 1 (best) BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 AC108846.1-201ENSMUST00000214531 513 ntBASIC11.64□□□□□ -0.55
Gm12887B1AVM1 AC151836.1-202ENSMUST00000226259 753 ntBASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Fam161a-205ENSMUST00000172602 1935 ntAPPRIS P1 TSL 2 BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Sox11-201ENSMUST00000079063 8311 ntAPPRIS P1 BASIC11.64□□□□□ -0.55
Gm12887B1AVM1 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Ggh-201ENSMUST00000098242 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 BC003965-201ENSMUST00000088307 3022 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Klrg1-201ENSMUST00000032207 1414 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Arid3a-201ENSMUST00000019708 5361 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Gm11185-201ENSMUST00000117732 1007 ntBASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Gm27742-201ENSMUST00000184667 60 ntBASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Vamp8-201ENSMUST00000059983 820 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Lhb-201ENSMUST00000072453 678 ntAPPRIS P1 TSL 2 BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 AC121801.1-201ENSMUST00000225363 1899 ntBASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Dusp12-201ENSMUST00000027970 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Gm12887B1AVM1 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms