Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 4930477E14Rik-201ENSMUST00000181412 621 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Gm37230-201ENSMUST00000194491 818 ntBASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Gm45098-201ENSMUST00000207179 657 ntBASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Gm45747-201ENSMUST00000212203 999 ntBASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Gm38102-201ENSMUST00000192791 1935 ntBASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Trav12-1A0N8R1 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12-1A0N8R1 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12-1A0N8R1 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC12.02□□□□□ -0.48
Trav12-1A0N8R1 Ash2l-202ENSMUST00000110608 2134 ntTSL 5 BASIC12.02□□□□□ -0.48
Trav12-1A0N8R1 H2-Q10-201ENSMUST00000068291 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12-1A0N8R1 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12-1A0N8R1 Haus5-201ENSMUST00000019697 2187 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12-1A0N8R1 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12-1A0N8R1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC12.02□□□□□ -0.48
Trav12-1A0N8R1 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Trav12-1A0N8R1 Elfn2-201ENSMUST00000088592 4846 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Tpi1-205ENSMUST00000172132 1607 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Gm16198-201ENSMUST00000118766 670 ntBASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Gm13597-201ENSMUST00000121239 375 ntBASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Gm27628-201ENSMUST00000184911 107 ntBASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Bhlha9-201ENSMUST00000056184 1207 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Gm15590-201ENSMUST00000078419 552 ntBASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Hoxa7-201ENSMUST00000048715 2009 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Dpp7-201ENSMUST00000028332 1682 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Gm11992-201ENSMUST00000043285 2400 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Ulk1-211ENSMUST00000200299 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Hsd17b11-202ENSMUST00000119025 2234 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Zswim8-204ENSMUST00000223840 5674 ntAPPRIS ALT2 BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Trav12-1A0N8R1 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Mmp14-206ENSMUST00000225641 3238 ntBASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Ighv4-1-201ENSMUST00000103464 414 ntAPPRIS P1 BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Timm9-205ENSMUST00000221178 529 ntTSL 3 BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.01□□□□□ -0.49
Trav12-1A0N8R1 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.01□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 33.1 ms