Protein–RNA interactions for Protein: A0AUP1

Ccdc112, Coiled-coil domain-containing protein 112, mousemouse

Predictions only

Length 442 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc112A0AUP1 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc112A0AUP1 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC16.46■□□□□ 0.22
Ccdc112A0AUP1 Tcf25-208ENSMUST00000212571 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc112A0AUP1 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.22
Ccdc112A0AUP1 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Susd3-202ENSMUST00000058196 1418 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Pdzd11-201ENSMUST00000015812 1626 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Phykpl-201ENSMUST00000020625 1609 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Trafd1-202ENSMUST00000120784 2425 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 E130218I03Rik-203ENSMUST00000125921 666 ntAPPRIS P1 TSL 2 BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 E130218I03Rik-206ENSMUST00000135228 544 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 E130218I03Rik-207ENSMUST00000143448 591 ntAPPRIS P1 TSL 3 BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Gm5479-201ENSMUST00000160578 435 ntBASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Gm45747-201ENSMUST00000212203 999 ntBASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 AC154222.1-201ENSMUST00000223882 475 ntBASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC16.45■□□□□ 0.22
Ccdc112A0AUP1 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Kcnk6-201ENSMUST00000085818 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 AC166491.1-201ENSMUST00000227053 2308 ntBASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Hoxa13-202ENSMUST00000114416 769 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Gm9385-201ENSMUST00000117563 472 ntBASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Ap2s1-204ENSMUST00000205607 372 ntTSL 3 BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 AC102291.3-201ENSMUST00000226566 405 ntBASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Erc1-207ENSMUST00000183911 3865 ntTSL 5 BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC16.44■□□□□ 0.22
Ccdc112A0AUP1 Mmp14-206ENSMUST00000225641 3238 ntBASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Tle3-201ENSMUST00000034820 4646 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Cdhr5-202ENSMUST00000167263 2628 ntAPPRIS ALT2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Sema6d-208ENSMUST00000103241 6157 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Fbxw7-204ENSMUST00000107679 4473 ntAPPRIS ALT1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Cyb5rl-204ENSMUST00000106760 840 ntTSL 3 BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 AC138767.1-201ENSMUST00000222661 415 ntBASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Sntb2-203ENSMUST00000212524 9945 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Gm13410-201ENSMUST00000117058 1415 ntBASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Ccdc112A0AUP1 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Eif4g1-204ENSMUST00000115460 5638 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Bbx-204ENSMUST00000114477 4516 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Ptprv-210ENSMUST00000183317 6108 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Kctd20-202ENSMUST00000117672 2219 ntTSL 5 BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 P4ha2-201ENSMUST00000019050 2230 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Mettl27-203ENSMUST00000111218 1387 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Arfgap1-214ENSMUST00000185115 1393 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Ccdc112A0AUP1 St6gal2-202ENSMUST00000086878 2606 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 30.9 ms