Protein–RNA interactions for Protein: A0A140LIX9

Cfap99, Cilia and flagella-associated protein 99, mousemouse

Predictions only

Length 648 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cfap99A0A140LIX9 Fam228b-201ENSMUST00000053458 2851 ntAPPRIS P2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Rxra-202ENSMUST00000100251 1952 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Map6-204ENSMUST00000127492 4920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Syt7-205ENSMUST00000224135 1557 ntBASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Mettl26-204ENSMUST00000169085 324 ntTSL 5 BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Gm27680-201ENSMUST00000184192 160 ntBASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Klk2-ps-201ENSMUST00000205342 571 ntBASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Mt1-201ENSMUST00000034215 549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Pcdha8-201ENSMUST00000194038 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Cfap99A0A140LIX9 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.21■□□□□ 0.34
Cfap99A0A140LIX9 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Cfap99A0A140LIX9 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
Cfap99A0A140LIX9 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Syndig1-201ENSMUST00000109934 2081 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Csnk1e-202ENSMUST00000120859 1391 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Pnma1-201ENSMUST00000061425 2359 ntAPPRIS P1 BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Gm12134-201ENSMUST00000122109 520 ntBASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 D11Bhm181e-201ENSMUST00000122252 282 ntBASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Lamtor3-201ENSMUST00000168345 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Gm26515-201ENSMUST00000181141 996 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Gm27533-201ENSMUST00000183800 152 ntBASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Gm27838-201ENSMUST00000184829 128 ntBASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Gm44344-201ENSMUST00000200287 129 ntBASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 AC132863.2-201ENSMUST00000226643 799 ntBASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Ifnl2-201ENSMUST00000081684 702 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Cbfa2t3-201ENSMUST00000006525 3161 ntAPPRIS ALT2 TSL 2 BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Brd7-201ENSMUST00000034085 3625 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Eif4ebp2-201ENSMUST00000020288 5784 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Nfe2l1-201ENSMUST00000081775 4654 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Syt7-204ENSMUST00000223586 1344 ntBASIC17.2■□□□□ 0.34
Cfap99A0A140LIX9 Hipk3-202ENSMUST00000111124 4125 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Gm15487-201ENSMUST00000122373 465 ntBASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Ncs1-201ENSMUST00000000199 4653 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Gm44855-201ENSMUST00000205725 362 ntBASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Spns1-202ENSMUST00000119754 2001 ntTSL 5 BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Wdr31-203ENSMUST00000120095 2549 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Ttc13-210ENSMUST00000214828 3301 ntAPPRIS P1 TSL 5 BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Foxj3-201ENSMUST00000044564 4789 ntAPPRIS P3 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
Cfap99A0A140LIX9 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Zfand3-201ENSMUST00000057897 2617 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Chmp1a-201ENSMUST00000000759 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Ccer1-201ENSMUST00000060703 1865 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Ntan1-202ENSMUST00000115805 984 ntTSL 3 BASIC17.18■□□□□ 0.34
Cfap99A0A140LIX9 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC17.18■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms