Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Tcf21-202ENSMUST00000218002 1788 ntBASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 B3gnt3-201ENSMUST00000034260 3055 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Gnas-210ENSMUST00000109095 2059 ntTSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.63□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm3928-201ENSMUST00000121141 1307 ntBASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Clstn2-202ENSMUST00000162295 4174 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Ahcyl2-201ENSMUST00000064872 2019 ntAPPRIS ALT1 TSL 5 BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Suv39h1-201ENSMUST00000115636 2707 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Edil3-203ENSMUST00000118731 2721 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Ap2a1-203ENSMUST00000166972 3449 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Camk2b-208ENSMUST00000109812 1875 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Coq4-201ENSMUST00000028137 1991 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Fam53b-204ENSMUST00000106165 1232 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Fam53b-205ENSMUST00000106166 1270 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Lyzl4-202ENSMUST00000120918 959 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm3264-202ENSMUST00000166776 882 ntAPPRIS ALT2 TSL 5 BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm5682-201ENSMUST00000173402 505 ntBASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm18246-201ENSMUST00000221023 728 ntBASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 AC154595.3-201ENSMUST00000224579 384 ntBASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Mmp14-206ENSMUST00000225641 3238 ntBASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Grk6-202ENSMUST00000099482 2169 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Zfp740-201ENSMUST00000118729 4241 ntAPPRIS ALT2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Arfip2-206ENSMUST00000131446 3275 ntAPPRIS P2 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC11.62□□□□□ -0.55
Trav6d-5A0A075B6B9 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Akt2-ps-201ENSMUST00000120718 1449 ntBASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Nomo1-201ENSMUST00000033121 4257 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Ppp1r12b-209ENSMUST00000168381 3621 ntAPPRIS P2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Smim1-210ENSMUST00000146054 707 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm17396-201ENSMUST00000172075 1655 ntTSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 AC025913.2-201ENSMUST00000220136 1766 ntBASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC11.61□□□□□ -0.55
Trav6d-5A0A075B6B9 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.61□□□□□ -0.55
Retrieved 100 of 76,532 protein–RNA pairs in 26.2 ms