Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Fhad1-202ENSMUST00000105779 4263 ntAPPRIS P1 TSL 5 BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Rpl36-ps8-201ENSMUST00000121187 315 ntBASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Gm26695-201ENSMUST00000180920 1251 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Mir7036b-201ENSMUST00000184791 63 ntBASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Coro6-201ENSMUST00000021190 1418 ntAPPRIS P5 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Mzt1-203ENSMUST00000227948 952 ntBASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Otub1-201ENSMUST00000025679 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Bex3-201ENSMUST00000053540 930 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Ptpn1-201ENSMUST00000029053 4213 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Gm44645-201ENSMUST00000205492 1653 ntBASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Gm5105-201ENSMUST00000053318 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Ilf2-201ENSMUST00000001042 2027 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Brix1-201ENSMUST00000022855 2664 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Nrap-201ENSMUST00000040711 5334 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Acap2-201ENSMUST00000058033 6493 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Hist1h4n-201ENSMUST00000102979 430 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Hist1h4m-201ENSMUST00000104941 402 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Dnajc8-206ENSMUST00000105940 772 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Gm13597-201ENSMUST00000121239 375 ntBASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Gm12981-201ENSMUST00000131733 622 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Gm9726-201ENSMUST00000180321 678 ntBASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Gm44107-201ENSMUST00000203242 573 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 AC154222.1-201ENSMUST00000223882 475 ntBASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 2410002F23Rik-218ENSMUST00000188382 2301 ntAPPRIS P2 TSL 5 BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Spsb1-203ENSMUST00000105685 1537 ntAPPRIS P1 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Ppp2r1b-211ENSMUST00000176798 2074 ntAPPRIS ALT2 TSL 5 BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Cgn-201ENSMUST00000107272 4963 ntAPPRIS ALT2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.06□□□□□ -0.48
Trav5-4A0A075B652 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Tmem184c-201ENSMUST00000034030 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Lmx1b-201ENSMUST00000041730 4790 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Gm45779-201ENSMUST00000212189 4064 ntBASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Mfrp-202ENSMUST00000161381 4254 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Mbnl2-204ENSMUST00000227012 2390 ntBASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Upk1a-201ENSMUST00000006476 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Spatc1-201ENSMUST00000074173 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Matn2-206ENSMUST00000228570 2798 ntBASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Wdr13-205ENSMUST00000130832 4374 ntTSL 5 BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Trav5-4A0A075B652 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 34.3 ms