Protein–RNA interactions for Protein: Q9WTU3

Scn8a, Sodium channel protein type 8 subunit alpha, mousemouse

Predictions only

Length 1,978 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn8aQ9WTU3 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 B4galnt1-201ENSMUST00000006914 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Sox17-201ENSMUST00000027035 3127 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Tef-201ENSMUST00000023024 4079 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Cadps2-204ENSMUST00000115356 3533 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Gng2-204ENSMUST00000160013 3826 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Fgfr1-214ENSMUST00000178276 4741 ntTSL 5 BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Gm12620-201ENSMUST00000119791 1986 ntBASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Gm12612-201ENSMUST00000140182 1986 ntBASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Nt5dc3-201ENSMUST00000099396 5952 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Gif-201ENSMUST00000025585 1537 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Gm38102-201ENSMUST00000192791 1935 ntBASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Capn12-201ENSMUST00000066880 3040 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Scn8aQ9WTU3 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Lrp5-201ENSMUST00000025856 5161 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Arhgef2-202ENSMUST00000107510 4390 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 AC126549.2-201ENSMUST00000223997 1976 ntBASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Tmem61-202ENSMUST00000177702 561 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Fmc1-201ENSMUST00000019833 479 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 CT030704.2-201ENSMUST00000228887 494 ntBASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Sox4-201ENSMUST00000067230 4795 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Naa50-203ENSMUST00000159514 3756 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Lims2-201ENSMUST00000025254 1870 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Mdga1-208ENSMUST00000171691 8339 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Ighv5-17-201ENSMUST00000103459 405 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Inpp4a-213ENSMUST00000193774 1243 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Gm45195-201ENSMUST00000205597 1008 ntBASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Gm5425-201ENSMUST00000214125 459 ntBASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Tspan3-203ENSMUST00000215906 842 ntTSL 3 BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Gm9797-201ENSMUST00000052902 613 ntBASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Myo9b-206ENSMUST00000212935 6316 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.4□□□□□ -0.1
Scn8aQ9WTU3 Tmem269-202ENSMUST00000212054 1504 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Acox1-201ENSMUST00000066587 3987 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Galnt18-202ENSMUST00000106663 2530 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Gm14452-201ENSMUST00000118680 1632 ntBASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Klhl26-202ENSMUST00000166976 2734 ntTSL 2 BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Gm12134-201ENSMUST00000122109 520 ntBASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Gm8584-201ENSMUST00000171982 758 ntBASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 H2-Bl-210ENSMUST00000195833 829 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 AC151828.1-201ENSMUST00000219552 661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Plekha1-201ENSMUST00000048180 3321 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Nupl1-207ENSMUST00000225311 2475 ntBASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Scn8aQ9WTU3 Rflnb-201ENSMUST00000021207 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 50 ms