Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Engase-202ENSMUST00000135383 4064 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Olfr129-201ENSMUST00000122318 993 ntBASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Mir3081-201ENSMUST00000175305 84 ntBASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Gm43077-201ENSMUST00000200602 491 ntTSL 3 BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Adgrg3-201ENSMUST00000051259 2439 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 D630023F18Rik-201ENSMUST00000050047 2180 ntAPPRIS P3 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Gas7-201ENSMUST00000041611 2968 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Asxl1-201ENSMUST00000109790 6968 ntAPPRIS P2 TSL 5 BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Ube4bQ9ES00 Rabl2-201ENSMUST00000023294 1640 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Snai1-201ENSMUST00000052631 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Mfsd4a-205ENSMUST00000144548 3288 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Phf21a-206ENSMUST00000111292 2461 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Hps3-202ENSMUST00000108321 3385 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Klk12-202ENSMUST00000107970 1115 ntAPPRIS P1 TSL 5 BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Dguok-202ENSMUST00000113888 1007 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Dguok-201ENSMUST00000014698 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Gm25406-201ENSMUST00000157599 105 ntBASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Gm27704-201ENSMUST00000185094 107 ntBASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Eif3h-201ENSMUST00000022925 1295 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Cecr2-202ENSMUST00000112686 9212 ntAPPRIS P2 TSL 5 BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Rnf10-202ENSMUST00000112096 3112 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.86□□□□□ -0.19
Ube4bQ9ES00 Gm2115-201ENSMUST00000180387 7055 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Aarsd1-201ENSMUST00000070395 1516 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Pax7-201ENSMUST00000030508 5854 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Olfml2a-201ENSMUST00000057279 5579 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 A530072M11Rik-201ENSMUST00000151122 1852 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 AC121801.1-201ENSMUST00000225363 1899 ntBASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Cluh-202ENSMUST00000117818 4284 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 1810010H24Rik-201ENSMUST00000106767 1100 ntAPPRIS P2 TSL 2 BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Mis18bp1-202ENSMUST00000124201 717 ntTSL 3 BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Gm16272-201ENSMUST00000128218 388 ntTSL 2 BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Pafah1b3-207ENSMUST00000155118 679 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Tcta-202ENSMUST00000192886 1094 ntAPPRIS P1 TSL 2 BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Gm44454-201ENSMUST00000198541 138 ntBASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Vegfc-203ENSMUST00000210831 555 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Nkx2-6-201ENSMUST00000062437 1134 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Lrrc24-202ENSMUST00000049956 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Ctdspl2-204ENSMUST00000110578 3386 ntAPPRIS ALT1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Gsdmd-201ENSMUST00000023238 1776 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Otub2-201ENSMUST00000021620 2791 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Gm32591-204ENSMUST00000208679 1806 ntTSL 5 BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Ifnlr1-201ENSMUST00000074408 4182 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Nol10-201ENSMUST00000046011 3021 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Ube4bQ9ES00 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Elf3-202ENSMUST00000185752 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Ube4bQ9ES00 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 23.2 ms