Protein–RNA interactions for Protein: Q9DC28

Csnk1d, Casein kinase I isoform delta, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Csnk1dQ9DC28 Mrto4-202ENSMUST00000102503 1221 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Krtap1-3-201ENSMUST00000104930 879 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Gm9109-201ENSMUST00000120254 1405 ntBASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Gm25925-201ENSMUST00000158314 306 ntBASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Gm10576-201ENSMUST00000191927 825 ntBASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Gm37596-201ENSMUST00000193565 1021 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Snx11-201ENSMUST00000021246 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Gm9229-201ENSMUST00000222777 126 ntBASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Cspg5-201ENSMUST00000035058 3870 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Cox6b1-201ENSMUST00000075738 618 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Prdm4-207ENSMUST00000220032 3962 ntTSL 5 BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Klhl12-202ENSMUST00000112232 3220 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
Csnk1dQ9DC28 Zfp612-202ENSMUST00000212754 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Csnk1dQ9DC28 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Csnk1dQ9DC28 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Csnk1dQ9DC28 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Csnk1dQ9DC28 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Csnk1dQ9DC28 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.12
Csnk1dQ9DC28 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Csnk1dQ9DC28 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Csnk1dQ9DC28 Fdx1-202ENSMUST00000214013 2759 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Csnk1dQ9DC28 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.12
Csnk1dQ9DC28 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Gm3436-201ENSMUST00000179930 840 ntBASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 1010001B22Rik-201ENSMUST00000181488 589 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Gm26808-201ENSMUST00000181569 411 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Gm27989-201ENSMUST00000184721 107 ntBASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Gm6916-202ENSMUST00000205523 195 ntBASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Gm20949-201ENSMUST00000206478 952 ntBASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 AC158982.1-201ENSMUST00000228377 901 ntBASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Syce1l-201ENSMUST00000034219 896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Syce1l-202ENSMUST00000095173 791 ntAPPRIS P4 TSL 1 (best) BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Cacna1b-201ENSMUST00000041342 6984 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Cdkl3-201ENSMUST00000063303 2765 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Csnk1dQ9DC28 Usp30-201ENSMUST00000031588 4604 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 4930513N10Rik-203ENSMUST00000145562 2803 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Nabp1-205ENSMUST00000186684 2677 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Vta1-205ENSMUST00000154132 1974 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Brwd3-202ENSMUST00000101283 1066 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Gm7820-201ENSMUST00000121012 1052 ntBASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Lgals3-203ENSMUST00000146468 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Tm7sf2-209ENSMUST00000161528 732 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Cox6b2-203ENSMUST00000182111 585 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Mir7684-201ENSMUST00000183858 60 ntBASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Mir8102-201ENSMUST00000184148 139 ntBASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Gm28942-201ENSMUST00000186334 365 ntTSL 3 BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Ighv1-25-201ENSMUST00000195638 345 ntBASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Myl6b-201ENSMUST00000026428 1026 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Lce1d-201ENSMUST00000029524 678 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Csnk1dQ9DC28 Gm28756-202ENSMUST00000209405 2461 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 133.3 ms