Protein–RNA interactions for Protein: Q9D0N7

Chaf1b, Chromatin assembly factor 1 subunit B, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chaf1bQ9D0N7 Cep131-201ENSMUST00000106227 3578 ntAPPRIS P2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chaf1bQ9D0N7 Cep131-202ENSMUST00000106229 3581 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chaf1bQ9D0N7 Cep131-207ENSMUST00000180242 3581 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.24
Chaf1bQ9D0N7 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chaf1bQ9D0N7 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC13.58□□□□□ -0.24
Chaf1bQ9D0N7 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.58□□□□□ -0.24
Chaf1bQ9D0N7 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chaf1bQ9D0N7 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.24
Chaf1bQ9D0N7 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chaf1bQ9D0N7 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.58□□□□□ -0.24
Chaf1bQ9D0N7 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Chaf1bQ9D0N7 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Nbeal2-206ENSMUST00000133191 8782 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Car10-203ENSMUST00000107858 2742 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Gcfc2-201ENSMUST00000043195 4192 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Mdk-204ENSMUST00000111309 771 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Tppp3-201ENSMUST00000014990 1127 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Gm4535-201ENSMUST00000182274 558 ntBASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Rps13-ps1-201ENSMUST00000183478 538 ntBASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 CT010506.4-201ENSMUST00000225457 351 ntBASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Inmt-201ENSMUST00000003569 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Gm10355-201ENSMUST00000097146 517 ntBASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Trabd2b-201ENSMUST00000094894 6617 ntAPPRIS P1 TSL 5 BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Nkain3-202ENSMUST00000119374 4567 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Tpm1-202ENSMUST00000034928 1824 ntTSL 5 BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Nudt18-201ENSMUST00000089049 3926 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Avpr1a-201ENSMUST00000020323 2670 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Chaf1bQ9D0N7 Snph-201ENSMUST00000028951 4730 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Mfsd3-201ENSMUST00000019224 2169 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Rab11fip1-202ENSMUST00000054212 7965 ntAPPRIS P3 TSL 5 BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Trav13-3-201ENSMUST00000117226 336 ntBASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Tmem176a-202ENSMUST00000168406 1086 ntAPPRIS P1 TSL 3 BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Gm9682-201ENSMUST00000197505 556 ntBASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Gm26646-202ENSMUST00000205705 439 ntTSL 5 BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 AC140264.2-201ENSMUST00000219668 289 ntTSL 2 BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Pfdn6-201ENSMUST00000025163 807 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Lce1i-201ENSMUST00000090866 731 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 D930028M14Rik-201ENSMUST00000098678 1003 ntTSL 2 BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Psmd12-201ENSMUST00000021063 1904 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Trim59-201ENSMUST00000107802 2939 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Chaf1bQ9D0N7 Gm8237-201ENSMUST00000164484 2051 ntAPPRIS P5 TSL 5 BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Sftpb-204ENSMUST00000183018 1490 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Plscr3-201ENSMUST00000019605 1927 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Chaf1bQ9D0N7 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 22.6 ms