Protein–RNA interactions for Protein: Q9D0E3

Lysmd1, LysM and putative peptidoglycan-binding domain-containing protein 1, mousemouse

Predictions only

Length 226 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd1Q9D0E3 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 4930407G08Rik-201ENSMUST00000145831 698 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Gm25951-201ENSMUST00000175330 64 ntBASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Gm6222-202ENSMUST00000182143 629 ntBASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 1700039I01Rik-201ENSMUST00000194370 479 ntBASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Gm43701-201ENSMUST00000202047 391 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Blvrb-201ENSMUST00000037399 1028 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
Lysmd1Q9D0E3 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lysmd1Q9D0E3 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC15.21■□□□□ 0.02
Lysmd1Q9D0E3 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Lysmd1Q9D0E3 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Adrb2-201ENSMUST00000053640 2143 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Slc29a1-202ENSMUST00000064889 1988 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Wfikkn1-201ENSMUST00000095487 1981 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 AC121598.2-201ENSMUST00000228376 2325 ntBASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Gse1-202ENSMUST00000118136 4492 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Rbm3-202ENSMUST00000115615 1183 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Rbm3-203ENSMUST00000115616 1225 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Gm14130-201ENSMUST00000118417 987 ntBASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 4930524O07Rik-201ENSMUST00000161822 1050 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 1110002L01Rik-203ENSMUST00000179637 586 ntTSL 5 BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Gm27017-201ENSMUST00000183031 656 ntTSL 3 BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 2010320M18Rik-201ENSMUST00000191396 1009 ntBASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Gm2511-202ENSMUST00000206158 455 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Acyp1-202ENSMUST00000065913 448 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Chchd1-201ENSMUST00000071215 616 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Gm10308-201ENSMUST00000095183 742 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Gm37015-201ENSMUST00000192763 1521 ntBASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Gm20604-201ENSMUST00000174651 2795 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Taf6l-205ENSMUST00000176496 2224 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Bmi1-201ENSMUST00000028071 3594 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Lysmd1Q9D0E3 Hck-204ENSMUST00000191431 1575 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Gm43579-201ENSMUST00000202387 1307 ntBASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Gal3st4-203ENSMUST00000161647 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Rubcn-201ENSMUST00000040986 5257 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Cd300lf-202ENSMUST00000106561 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Naif1-201ENSMUST00000048431 4650 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Crb3-205ENSMUST00000169543 778 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Gm7030-202ENSMUST00000172968 899 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Gm7029-201ENSMUST00000173226 450 ntBASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Gm27772-201ENSMUST00000184900 187 ntBASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Gm42550-201ENSMUST00000201553 960 ntBASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Gm34549-203ENSMUST00000208300 896 ntTSL 5 BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Gm45770-201ENSMUST00000212105 616 ntBASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Mpzl2-205ENSMUST00000217097 1175 ntTSL 5 BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Kitl-204ENSMUST00000218200 564 ntTSL 5 BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Gm2824-203ENSMUST00000226189 1228 ntBASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Taz-204ENSMUST00000124200 1742 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Myo5b-201ENSMUST00000074157 6745 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Whrn-205ENSMUST00000095038 2665 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Lysmd1Q9D0E3 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Col18a1-202ENSMUST00000081654 5063 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Bmp2k-201ENSMUST00000035635 7387 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Sh3bp1-201ENSMUST00000001226 2510 ntTSL 5 BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Mis12-206ENSMUST00000164220 1416 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Gm5846-201ENSMUST00000193146 1414 ntBASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Vsig10l-204ENSMUST00000203769 2473 ntAPPRIS P2 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Ncmap-202ENSMUST00000105857 958 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Rps9-204ENSMUST00000108625 914 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Gm20521-201ENSMUST00000134077 1245 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Gm13850-201ENSMUST00000140465 623 ntTSL 3 BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Gm13070-201ENSMUST00000146532 768 ntTSL 5 BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Gm5070-201ENSMUST00000177599 862 ntBASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Gm9726-201ENSMUST00000180321 678 ntBASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Gm26636-201ENSMUST00000181696 1115 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Lysmd1Q9D0E3 Gm17087-201ENSMUST00000184183 471 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 23.4 ms