Protein–RNA interactions for Protein: Q9CZN7

Shmt2, Serine hydroxymethyltransferase, mousemouse

Known RBP Predictions only

Length 504 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shmt2Q9CZN7 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt2Q9CZN7 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.8□□□□□ -0.2
Shmt2Q9CZN7 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Shmt2Q9CZN7 Rps6kb2-202ENSMUST00000118483 1409 ntTSL 5 BASIC13.8□□□□□ -0.2
Shmt2Q9CZN7 Zfp109-201ENSMUST00000037448 1935 ntAPPRIS P2 TSL 5 BASIC13.8□□□□□ -0.2
Shmt2Q9CZN7 Nfat5-203ENSMUST00000125721 5899 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Shmt2Q9CZN7 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt2Q9CZN7 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt2Q9CZN7 Myo1c-201ENSMUST00000069057 4547 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt2Q9CZN7 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.8□□□□□ -0.2
Shmt2Q9CZN7 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Shmt2Q9CZN7 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Shmt2Q9CZN7 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Shmt2Q9CZN7 Gjb1-203ENSMUST00000119190 1585 ntAPPRIS P1 TSL 2 BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Arhgef12-202ENSMUST00000165665 10752 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Cd3eap-201ENSMUST00000047036 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Fam76a-201ENSMUST00000030696 3053 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Slc31a2-203ENSMUST00000107468 743 ntAPPRIS ALT1 TSL 5 BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Usf2-202ENSMUST00000108119 849 ntTSL 5 BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Nudt1-204ENSMUST00000110826 606 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Tsen15-205ENSMUST00000162371 431 ntTSL 5 BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Ccnd3-208ENSMUST00000182539 931 ntTSL 2 BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 1700021A07Rik-203ENSMUST00000188024 404 ntTSL 3 BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Gm44492-201ENSMUST00000197012 141 ntBASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 1700030N18Rik-201ENSMUST00000202497 966 ntBASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Cidea-201ENSMUST00000025404 1164 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Olfr541-201ENSMUST00000080681 1103 ntAPPRIS P1 BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Gm10175-201ENSMUST00000086013 645 ntBASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Fbxo21-206ENSMUST00000202447 3959 ntAPPRIS P3 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Zfp202-201ENSMUST00000026693 3461 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Nfya-206ENSMUST00000160319 1407 ntTSL 5 BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Slc16a13-201ENSMUST00000060010 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.79□□□□□ -0.2
Shmt2Q9CZN7 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Lrp4-201ENSMUST00000028689 7926 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Aig1-202ENSMUST00000105534 617 ntTSL 5 BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Gm11594-201ENSMUST00000122313 162 ntBASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Gm17968-201ENSMUST00000194902 784 ntBASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Ndufaf2-202ENSMUST00000223734 556 ntBASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Slbp-202ENSMUST00000075670 1027 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Gm10154-201ENSMUST00000084445 354 ntBASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Zdhhc25-201ENSMUST00000066949 1368 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Gm13410-201ENSMUST00000117058 1415 ntBASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Apbb1-213ENSMUST00000189265 1429 ntTSL 5 BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Atp13a3-202ENSMUST00000100013 7310 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Tgfbr2-202ENSMUST00000061101 8092 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Aldh1b1-201ENSMUST00000044384 2298 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Shmt2Q9CZN7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.5 ms