Protein–RNA interactions for Protein: Q9CZ83

Mrpl55, 39S ribosomal protein L55, mitochondrial, mousemouse

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mrpl55Q9CZ83 Dhodh-209ENSMUST00000143900 1455 ntTSL 5 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Nr3c1-201ENSMUST00000025300 4989 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Vps26a-202ENSMUST00000105447 2597 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Map3k12-207ENSMUST00000169377 4210 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Ap5m1-205ENSMUST00000227431 3757 ntBASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
Mrpl55Q9CZ83 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Egr2-202ENSMUST00000105438 2864 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Fbxl21-201ENSMUST00000045428 1965 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Hid1-202ENSMUST00000106542 3276 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Gm16976-202ENSMUST00000127408 1515 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Vmn1r45-207ENSMUST00000228492 2849 ntBASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Gm10728-201ENSMUST00000194292 1829 ntBASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Ftl2-ps-201ENSMUST00000118517 552 ntBASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Gm8344-201ENSMUST00000119813 856 ntBASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Hbb-bh0-201ENSMUST00000124800 129 ntBASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Gm11780-201ENSMUST00000136880 516 ntBASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 1700028B04Rik-202ENSMUST00000190841 971 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Gm43661-201ENSMUST00000199099 687 ntTSL 3 BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Syce1l-204ENSMUST00000212269 753 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Gins1-201ENSMUST00000028948 1087 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Gm15590-201ENSMUST00000078419 552 ntBASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Cds2-201ENSMUST00000089461 8073 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Tbc1d2-201ENSMUST00000084621 4315 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Cntnap4-201ENSMUST00000034225 4848 ntAPPRIS P2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Ddit4l-201ENSMUST00000053855 2722 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Uimc1-202ENSMUST00000099496 1678 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Stxbp3-205ENSMUST00000138552 1789 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Krt83-201ENSMUST00000023718 1756 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Rnf114-202ENSMUST00000109214 3001 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Edrf1-202ENSMUST00000128901 4380 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Rad51b-202ENSMUST00000171210 1858 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Tjap1-214ENSMUST00000225413 2189 ntAPPRIS ALT2 BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Ilvbl-212ENSMUST00000220430 2350 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
Mrpl55Q9CZ83 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Nmur1-203ENSMUST00000212541 1534 ntTSL 5 BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 A4galt-202ENSMUST00000164614 2128 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Prss23-201ENSMUST00000041761 3228 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Men1-208ENSMUST00000113504 2663 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Ighg1-202ENSMUST00000194304 2482 ntAPPRIS P5 BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Lrrc56-201ENSMUST00000047093 2197 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Ccdc85a-202ENSMUST00000093253 5431 ntAPPRIS P3 TSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Cpne1-201ENSMUST00000079312 1683 ntTSL 5 BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Gnb2-212ENSMUST00000150063 1569 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 4933433G15Rik-201ENSMUST00000180533 1481 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Anp32e-201ENSMUST00000015893 1381 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Gm11536-201ENSMUST00000130733 535 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Egfl8-201ENSMUST00000015611 1150 ntAPPRIS P2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 1600014C10Rik-209ENSMUST00000179992 568 ntTSL 3 BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Sod1-201ENSMUST00000023707 646 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Ly6g6f-201ENSMUST00000038507 1141 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Sf3b6-201ENSMUST00000046207 1180 ntAPPRIS P1 TSL 1 (best) BASIC9.56□□□□□ -0.88
Mrpl55Q9CZ83 Egfl8-202ENSMUST00000097345 1064 ntAPPRIS ALT2 TSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms