Protein–RNA interactions for Protein: Q9CYB0

Trim13, E3 ubiquitin-protein ligase TRIM13, mousemouse

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim13Q9CYB0 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Gm37691-201ENSMUST00000192147 2573 ntBASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 B130055M24Rik-201ENSMUST00000144796 1778 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Wwox-202ENSMUST00000109107 2383 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Grb2-203ENSMUST00000106497 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Ick-203ENSMUST00000117330 2698 ntAPPRIS ALT2 TSL 2 BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC13.35□□□□□ -0.27
Trim13Q9CYB0 AC159106.1-201ENSMUST00000224421 690 ntBASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Psmb4-201ENSMUST00000005923 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Ptprcap-201ENSMUST00000061086 927 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Cyp27a1-201ENSMUST00000027356 1892 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Hk1-202ENSMUST00000099691 4278 ntAPPRIS ALT2 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
Trim13Q9CYB0 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Dab2ip-206ENSMUST00000112987 6287 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Myh3-201ENSMUST00000007301 5992 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Casc4-203ENSMUST00000089915 3475 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Dnmt3b-203ENSMUST00000081628 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Gm38973-201ENSMUST00000206810 878 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 AC151836.1-202ENSMUST00000226259 753 ntBASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Mapk8-201ENSMUST00000022504 2587 ntAPPRIS P5 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Akna-201ENSMUST00000035724 5387 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Cdk8-205ENSMUST00000161181 2467 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC13.34□□□□□ -0.27
Trim13Q9CYB0 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim13Q9CYB0 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim13Q9CYB0 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.33□□□□□ -0.27
Trim13Q9CYB0 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim13Q9CYB0 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
Trim13Q9CYB0 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
Trim13Q9CYB0 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Tmem81-202ENSMUST00000188789 1751 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Aida-201ENSMUST00000109166 4279 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Rabepk-203ENSMUST00000118108 1431 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Hnrnpa2b1-201ENSMUST00000069949 1647 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Ctps-201ENSMUST00000030381 2705 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Rhox2h-201ENSMUST00000115162 779 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Rasl2-9-201ENSMUST00000147835 1013 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Tecpr1-201ENSMUST00000085701 5106 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Bace1-201ENSMUST00000034591 6058 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Dcaf10-204ENSMUST00000155551 7250 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Dnase2a-201ENSMUST00000003910 1715 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
Trim13Q9CYB0 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 78.8 ms