Protein–RNA interactions for Protein: Q9CY50

Ssr1, Translocon-associated protein subunit alpha, mousemouse

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ssr1Q9CY50 Mir5131-201ENSMUST00000175426 93 ntBASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Gm20680-201ENSMUST00000176881 789 ntTSL 5 BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Nr1i3-203ENSMUST00000111328 1359 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Pde12-201ENSMUST00000052932 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Bcs1l-201ENSMUST00000027358 1890 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Fut7-202ENSMUST00000100320 2076 ntAPPRIS ALT2 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC15.69■□□□□ 0.1
Ssr1Q9CY50 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Slc7a15-201ENSMUST00000036938 1907 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Ppp2r5b-201ENSMUST00000025695 2742 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Clpb-202ENSMUST00000106998 2287 ntAPPRIS ALT2 TSL 5 BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 AC025913.2-201ENSMUST00000220136 1766 ntBASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 H2-Q6-201ENSMUST00000113879 981 ntAPPRIS P1 TSL 2 BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Gm5914-202ENSMUST00000182863 375 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Gm29103-201ENSMUST00000191034 598 ntTSL 5 BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Rbl2-208ENSMUST00000209518 4792 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Sirt2-201ENSMUST00000072965 1843 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Vav1-201ENSMUST00000005889 2963 ntAPPRIS P3 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Cers5-202ENSMUST00000109035 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Slc22a15-201ENSMUST00000106928 6573 ntAPPRIS P1 TSL 5 BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Shd-202ENSMUST00000223629 1430 ntAPPRIS P2 BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC15.68■□□□□ 0.1
Ssr1Q9CY50 Mfng-201ENSMUST00000018313 1865 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Arhgef17-201ENSMUST00000107032 10190 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Abl2-201ENSMUST00000027888 3549 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Slc13a3-201ENSMUST00000029208 3524 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Ermard-202ENSMUST00000061688 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Zfp346-201ENSMUST00000021937 3333 ntAPPRIS P2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Ankrd34a-201ENSMUST00000058943 2583 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Tpt1-ps6-201ENSMUST00000121768 523 ntBASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 1110035H17Rik-202ENSMUST00000205672 1231 ntBASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Mtus2-201ENSMUST00000071878 1211 ntTSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 G3bp2-203ENSMUST00000167918 4232 ntAPPRIS ALT1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Asah1-201ENSMUST00000034000 2773 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.67■□□□□ 0.1
Ssr1Q9CY50 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC15.66■□□□□ 0.1
Ssr1Q9CY50 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr1Q9CY50 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr1Q9CY50 Cckar-201ENSMUST00000031093 2930 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr1Q9CY50 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC15.66■□□□□ 0.1
Ssr1Q9CY50 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr1Q9CY50 Idh3b-201ENSMUST00000028892 1616 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr1Q9CY50 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC15.66■□□□□ 0.1
Ssr1Q9CY50 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC15.66■□□□□ 0.1
Ssr1Q9CY50 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr1Q9CY50 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr1Q9CY50 Plpp2-205ENSMUST00000218241 825 ntAPPRIS ALT2 TSL 3 BASIC15.66■□□□□ 0.1
Ssr1Q9CY50 Rpl30-202ENSMUST00000079735 886 ntAPPRIS P1 TSL 1 (best) BASIC15.66■□□□□ 0.1
Ssr1Q9CY50 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC15.66■□□□□ 0.1
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms