Protein–RNA interactions for Protein: Q9CWX4

Rpusd4, Mitochondrial RNA pseudouridine synthase Rpusd4, mousemouse

Known RBP Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpusd4Q9CWX4 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 Mllt6-201ENSMUST00000044730 7274 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 Fnip2-201ENSMUST00000076136 3775 ntAPPRIS P2 TSL 5 BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 Anxa3-201ENSMUST00000031447 1595 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
Rpusd4Q9CWX4 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Dmkn-202ENSMUST00000054427 2034 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Gm11906-201ENSMUST00000124792 680 ntTSL 5 BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Gm5264-201ENSMUST00000190584 848 ntBASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Rpl31-205ENSMUST00000194746 703 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Gm11127-201ENSMUST00000113742 1344 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Arfip1-203ENSMUST00000143514 1343 ntAPPRIS P1 TSL 5 BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Sirt5-203ENSMUST00000220576 1579 ntTSL 5 BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Islr2-204ENSMUST00000165276 3989 ntAPPRIS P3 TSL 2 BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
Rpusd4Q9CWX4 Cacna1g-202ENSMUST00000100561 8125 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Npc2-201ENSMUST00000021668 3299 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Cntfr-204ENSMUST00000102962 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 1110004F10Rik-203ENSMUST00000106608 927 ntTSL 3 BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Higd1b-202ENSMUST00000107072 497 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Higd1b-203ENSMUST00000107073 530 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Gm21586-201ENSMUST00000107988 264 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Gm21953-201ENSMUST00000108002 264 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 D030068K23Rik-201ENSMUST00000180382 2617 ntTSL 2 BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Gm20878-208ENSMUST00000181518 264 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Higd1b-201ENSMUST00000021302 735 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Acot6-202ENSMUST00000222921 3622 ntBASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Mzb1-201ENSMUST00000025211 905 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Irf7-201ENSMUST00000026571 1916 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Ccdc27-201ENSMUST00000047207 2089 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Pou2f2-209ENSMUST00000175774 7047 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Gm42878-202ENSMUST00000200170 4783 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Aggf1-201ENSMUST00000022189 3249 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Tial1-203ENSMUST00000106228 2835 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
Rpusd4Q9CWX4 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC12.23□□□□□ -0.45
Rpusd4Q9CWX4 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC12.23□□□□□ -0.45
Rpusd4Q9CWX4 Cacnb4-206ENSMUST00000178799 7981 ntTSL 5 BASIC12.23□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms