Protein–RNA interactions for Protein: Q9CQE1

Nipsnap3b, Protein NipSnap homolog 3B, mousemouse

Predictions only

Length 247 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nipsnap3bQ9CQE1 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Prr18-201ENSMUST00000069742 3407 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 AC164565.1-201ENSMUST00000217520 1484 ntBASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Rtn4-205ENSMUST00000102843 4618 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Phldb1-214ENSMUST00000147495 5424 ntAPPRIS P5 TSL 5 BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC14.24□□□□□ -0.13
Nipsnap3bQ9CQE1 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 D6Ertd527e-204ENSMUST00000204927 2218 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Ubxn4-201ENSMUST00000027592 4113 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Os9-201ENSMUST00000080975 2458 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Snai3-201ENSMUST00000006762 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Mcur1-201ENSMUST00000021800 4339 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Acat3-201ENSMUST00000043923 2123 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Mpc1-205ENSMUST00000142594 961 ntTSL 5 BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Klk15-201ENSMUST00000068625 845 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Tcp11l1-201ENSMUST00000028597 3512 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Fam133b-201ENSMUST00000115527 1491 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Aptx-201ENSMUST00000030119 5250 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Spred2-202ENSMUST00000093299 4449 ntTSL 5 BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC14.23□□□□□ -0.13
Nipsnap3bQ9CQE1 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Ntn4-201ENSMUST00000020204 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Acot6-202ENSMUST00000222921 3622 ntBASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Nosip-202ENSMUST00000107829 972 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Rpl34-ps1-201ENSMUST00000121998 354 ntBASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Pold4-201ENSMUST00000025773 910 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Rpl34-ps2-201ENSMUST00000081679 354 ntBASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm10154-201ENSMUST00000084445 354 ntBASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Peli1-201ENSMUST00000093290 3514 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Taf3-201ENSMUST00000026888 4792 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nipsnap3bQ9CQE1 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Gm5069-201ENSMUST00000050581 1328 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Dzip1-202ENSMUST00000047208 4476 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Mtif3-203ENSMUST00000110564 1257 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Mtif3-204ENSMUST00000110566 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.21□□□□□ -0.13
Nipsnap3bQ9CQE1 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 70.8 ms