Protein–RNA interactions for Protein: Q9CQA6

Chchd1, Coiled-coil-helix-coiled-coil-helix domain-containing protein 1, mousemouse

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chchd1Q9CQA6 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Tmtc3-201ENSMUST00000058154 5993 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Phb-204ENSMUST00000125172 1799 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Mb21d1-201ENSMUST00000034898 3231 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Pdrg1-201ENSMUST00000028972 1273 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 H2-Eb1-201ENSMUST00000074557 1184 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Gm1673-201ENSMUST00000094869 477 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Grin1-204ENSMUST00000114310 4276 ntTSL 5 BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Slc33a1-201ENSMUST00000029402 3150 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Gm15082-201ENSMUST00000147045 1960 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Eya1-201ENSMUST00000027066 4347 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Cebpd-201ENSMUST00000096232 3746 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Gm45293-201ENSMUST00000209754 1812 ntBASIC10.86□□□□□ -0.67
Chchd1Q9CQA6 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Bysl-201ENSMUST00000024783 3854 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Nlrp6-204ENSMUST00000184560 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Eif5a-210ENSMUST00000108613 1343 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Ssu2-201ENSMUST00000060847 1321 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Epb41-203ENSMUST00000084253 5141 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Gm26841-201ENSMUST00000180725 1787 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Zfp148-202ENSMUST00000165418 9431 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Nrn1-203ENSMUST00000223611 1443 ntBASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Tex10-201ENSMUST00000030030 3102 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Zyx-201ENSMUST00000070635 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Gm27405-201ENSMUST00000184201 112 ntBASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 B230217C12Rik-201ENSMUST00000054783 1189 ntAPPRIS P1 TSL 5 BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Prss48-201ENSMUST00000061343 949 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Evi5l-202ENSMUST00000176072 3932 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Paupar-201ENSMUST00000194826 3482 ntBASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Alox8-202ENSMUST00000094078 1947 ntAPPRIS ALT2 TSL 5 BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 4930430F08Rik-201ENSMUST00000054471 2564 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Stra8-203ENSMUST00000114999 1455 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Spag9-202ENSMUST00000041956 7340 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Dars2-201ENSMUST00000035430 3619 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Traf1-202ENSMUST00000113064 2325 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Col26a1-201ENSMUST00000057497 2724 ntAPPRIS P3 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Gpr153-203ENSMUST00000105651 3777 ntAPPRIS P2 TSL 5 BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Gpr153-201ENSMUST00000055754 3757 ntAPPRIS P2 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC10.85□□□□□ -0.67
Chchd1Q9CQA6 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Gm10518-201ENSMUST00000097454 1301 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Gm43061-201ENSMUST00000198850 2241 ntBASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 C530008M17Rik-204ENSMUST00000121160 6921 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Rab11fip1-201ENSMUST00000033878 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Gpx4-202ENSMUST00000105372 959 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Tspan2-203ENSMUST00000196611 682 ntTSL 5 BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Gm43767-201ENSMUST00000198933 381 ntBASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Jkamp-201ENSMUST00000057257 1292 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Krt23-201ENSMUST00000006969 1565 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 9030612E09Rik-201ENSMUST00000053792 1859 ntAPPRIS P1 BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Cnih4-204ENSMUST00000134115 3268 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Crybg1-202ENSMUST00000200401 7525 ntAPPRIS ALT2 TSL 5 BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC10.84□□□□□ -0.67
Chchd1Q9CQA6 Tbc1d9b-201ENSMUST00000093138 4407 ntAPPRIS P3 TSL 1 (best) BASIC10.84□□□□□ -0.67
Retrieved 100 of 76,532 protein–RNA pairs in 44.4 ms