Protein–RNA interactions for Protein: Q99PQ2

Trim11, E3 ubiquitin-protein ligase TRIM11, mousemouse

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim11Q99PQ2 Gm6226-201ENSMUST00000117765 1146 ntBASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Rpl39l-202ENSMUST00000121292 550 ntAPPRIS P1 TSL 2 BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Lhx1os-201ENSMUST00000126072 589 ntTSL 3 BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Rps27l-203ENSMUST00000127896 575 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Med22-201ENSMUST00000015920 973 ntAPPRIS P4 TSL 2 BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Gm27920-201ENSMUST00000183953 96 ntBASIC16.44■□□□□ 0.22
Trim11Q99PQ2 A430093F15Rik-205ENSMUST00000188480 509 ntTSL 3 BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Gm18206-201ENSMUST00000207027 926 ntBASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Gm36584-201ENSMUST00000209046 708 ntTSL 1 (best) BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 AC159635.2-201ENSMUST00000223092 817 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 CT030684.1-201ENSMUST00000227292 914 ntBASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Gm45630-201ENSMUST00000210243 1911 ntBASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Abi3-201ENSMUST00000059026 4006 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Fbxl4-201ENSMUST00000039234 2546 ntAPPRIS P1 TSL 1 (best) BASIC16.44■□□□□ 0.22
Trim11Q99PQ2 Stx5a-201ENSMUST00000010254 1780 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Col7a1-202ENSMUST00000112070 9250 ntAPPRIS P1 TSL 5 BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Snu13-203ENSMUST00000166578 1061 ntTSL 2 BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Tbcc-201ENSMUST00000040434 1164 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Tst-201ENSMUST00000058659 1096 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 A830031A19Rik-201ENSMUST00000068360 757 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Eif5-201ENSMUST00000050993 1969 ntAPPRIS P2 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Ralgapb-201ENSMUST00000046274 8366 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Sf1-204ENSMUST00000113489 2863 ntTSL 5 BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Mis18a-201ENSMUST00000099554 1333 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC16.43■□□□□ 0.22
Trim11Q99PQ2 Kcnq2-202ENSMUST00000049792 2920 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Id2-202ENSMUST00000221761 1969 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Kif21b-201ENSMUST00000075164 9115 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Gm21451-201ENSMUST00000111062 2775 ntBASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Commd5-202ENSMUST00000109793 920 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Il15ra-206ENSMUST00000114834 784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Gm10244-202ENSMUST00000156905 474 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Gm17271-201ENSMUST00000165535 355 ntBASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Psmg3-202ENSMUST00000182602 733 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Cda-201ENSMUST00000030535 846 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Cyp2d40-201ENSMUST00000055721 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 C1qtnf2-201ENSMUST00000057679 1211 ntAPPRIS P2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Arid4b-203ENSMUST00000110534 5864 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Wdfy3-206ENSMUST00000174698 3858 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Emilin3-201ENSMUST00000057169 3547 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Akap17b-201ENSMUST00000051906 6003 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Elk4-201ENSMUST00000027696 1586 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Abat-202ENSMUST00000115838 1348 ntTSL 2 BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Mef2b-205ENSMUST00000163756 1337 ntAPPRIS P3 TSL 2 BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC16.42■□□□□ 0.22
Trim11Q99PQ2 Sync-201ENSMUST00000102599 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Limk1-201ENSMUST00000015137 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Fam170b-201ENSMUST00000104926 1694 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Raf1-201ENSMUST00000000451 3070 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Gm6973-201ENSMUST00000117080 721 ntBASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Gm11543-201ENSMUST00000120758 370 ntBASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Tpt1-205ENSMUST00000142061 996 ntTSL 5 BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 A830052D11Rik-201ENSMUST00000181729 1130 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Trim11Q99PQ2 Gm45669-201ENSMUST00000209808 459 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms