Protein–RNA interactions for Protein: Q99PJ2

Trim8, Probable E3 ubiquitin-protein ligase TRIM8, mousemouse

Predictions only

Length 551 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim8Q99PJ2 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
Trim8Q99PJ2 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Spns1-201ENSMUST00000032994 2219 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 9330182L06Rik-201ENSMUST00000069538 4688 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Syngr1-201ENSMUST00000009727 4180 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Gm28111-201ENSMUST00000187786 1393 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Cbx6-201ENSMUST00000109623 996 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Tmem141-205ENSMUST00000142087 795 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Gm6550-201ENSMUST00000187574 993 ntBASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Gm6376-201ENSMUST00000209407 580 ntBASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Rps4l-201ENSMUST00000071745 943 ntBASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Hectd1-201ENSMUST00000042052 8988 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 4632428C04Rik-201ENSMUST00000181485 2430 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Cox16-201ENSMUST00000002757 2007 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Trim8Q99PJ2 Gsg1-201ENSMUST00000087729 1307 ntAPPRIS P4 TSL 1 (best) BASIC14.15□□□□□ -0.15
Trim8Q99PJ2 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Gtf2b-201ENSMUST00000029938 1455 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Pde4dip-205ENSMUST00000168438 8264 ntAPPRIS ALT2 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Rhox13-201ENSMUST00000152730 876 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Ubl5-204ENSMUST00000160682 489 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Tnnt2-205ENSMUST00000178204 1172 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Tnnt2-207ENSMUST00000179863 1097 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Tnnt2-209ENSMUST00000188028 1200 ntAPPRIS P4 TSL 5 BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Shisa5-218ENSMUST00000200515 1005 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 4930431F12Rik-201ENSMUST00000079389 429 ntTSL 5 BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Aldh1a2-201ENSMUST00000034723 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Arhgap4-204ENSMUST00000114406 2749 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Gm45779-201ENSMUST00000212189 4064 ntBASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Erbb2-201ENSMUST00000058295 5012 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Gm14451-201ENSMUST00000121581 1542 ntBASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Celsr1-201ENSMUST00000016172 10879 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Gm43868-201ENSMUST00000205187 2114 ntBASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Gins4-201ENSMUST00000033950 1349 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Erfe-201ENSMUST00000086861 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
Trim8Q99PJ2 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Pcdhga8-201ENSMUST00000066149 4730 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Mbp-203ENSMUST00000075372 2075 ntAPPRIS ALT2 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Gm42471-201ENSMUST00000201457 1865 ntBASIC14.13□□□□□ -0.15
Trim8Q99PJ2 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Gm15593-201ENSMUST00000122085 1008 ntBASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Gm7230-201ENSMUST00000173026 815 ntBASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Gm9726-201ENSMUST00000180321 678 ntBASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Idnk-201ENSMUST00000051490 764 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Ndufs8-201ENSMUST00000075092 963 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.13□□□□□ -0.15
Trim8Q99PJ2 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.13□□□□□ -0.15
Retrieved 100 of 76,532 protein–RNA pairs in 29.9 ms